RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 TMEM131Q92545 1883 aa18.13■□□□□ 0.49
CHMP4A-211ENST00000609024 SHROOM3Q8TF72 1996 aa18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 RFPL3O75679 317 aa18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 NR3C1P04150 777 aa18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 C1SP09871 688 aa18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 ITPKBP27987 946 aa18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 ST8SIA6P61647 398 aa18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 RPS14P62263 151 aaKnown RBP18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 RACK1P63244 317 aaKnown RBP18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 ZNF394Q53GI3 561 aa18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 PPP1R26Q5T8A7 1209 aaPredicted RBP18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 ZNF776Q68DI1 518 aaPredicted RBP18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 KIAA0895LQ68EN5 471 aa18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 SLC9A9Q8IVB4 645 aa18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 FCRL3Q96P31 734 aaPredicted RBP18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 BACH2Q9BYV9 841 aa18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 NIF3L1Q9GZT8 377 aa18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 ABCB8Q9NUT2 735 aa18.12■□□□□ 0.49
CHMP4A-211ENST00000609024 ASXL3Q9C0F0 2248 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 A0A1B0GTQ1 180 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 VILLO15195 856 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 CALUO43852 315 aaPredicted RBP18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 KRT13P13646 458 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 POLR2EP19388 210 aaKnown RBP18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 EIF2S3P41091 472 aaKnown RBP18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 VAMP7P51809 220 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 PDE4CQ08493 712 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 CUL4BQ13620 913 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 KMT5BQ4FZB7 885 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 GATAD2AQ86YP4 633 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 LSM14AQ8ND56 463 aaKnown RBP18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 ELF4Q99607 663 aaPredicted RBP18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 TMEM245Q9H330 911 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 MMRN2Q9H8L6 949 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 PRSS16Q9NQE7 514 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 AASDHPPTQ9NRN7 309 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 GGA2Q9UJY4 613 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 SCML1Q9UN30 329 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 MTMR6Q9Y217 621 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 CABIN1Q9Y6J0 2220 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 CELSR3Q9NYQ7 3312 aa18.11■□□□□ 0.49
CHMP4A-211ENST00000609024 LRRC72A6NJI9 287 aa18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 PDXKO00764 312 aa18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 YKT6O15498 198 aa18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 DLDP09622 509 aaKnown RBP18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 PABPC1P11940 636 aaKnown RBP18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 HOXD9P28356 352 aaPredicted RBP18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 HLA-FP30511 346 aa18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 ARRB1P49407 418 aaPredicted RBP18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 TKTL1P51854 596 aa18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 SLC45A4Q5BKX6 768 aa18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 MBLAC2Q68D91 279 aa18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 SHC4Q6S5L8 630 aa18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 FMNL3Q8IVF7 1028 aa18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 CCDC117Q8IWD4 279 aaPredicted RBP18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 TTC39CQ8N584 583 aa18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 RBBP8NLQ8NC74 664 aaPredicted RBP18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 GDF3Q9NR23 364 aa18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 DMAC2Q9NW81 257 aa18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 FLNBO75369 2602 aaKnown RBP18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 HELZ2Q9BYK8 2649 aaKnown RBP18.1■□□□□ 0.49
CHMP4A-211ENST00000609024 KNL1Q8NG31 2342 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 PAPSS1O43252 624 aaPredicted RBP18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 YEATS4O95619 227 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 ZBED1O96006 694 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 SLFN14P0C7P3 912 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 TARDBPQ13148 414 aaKnown RBP eCLIP18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 KCNT1Q5JUK3 1230 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 USP30Q70CQ3 517 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 GPR155Q7Z3F1 870 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 PIGZQ86VD9 579 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 FAM217AQ8IXS0 508 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 EID2Q8N6I1 236 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 ZNF557Q8N988 423 aaPredicted RBP18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 SLC6A18Q96N87 628 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 IPO9Q96P70 1041 aaKnown RBP18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 OMDQ99983 421 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 UBXN6Q9BZV1 441 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 NRSN2Q9GZP1 204 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 PRORYQ9H606 182 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 LRRC4Q9HBW1 653 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 FBXL12Q9NXK8 326 aa18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 HBS1LQ9Y450 684 aaKnown RBP18.09■□□□□ 0.49
CHMP4A-211ENST00000609024 A0A1W2PPC4 97 aa18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 TYW5A2RUC4 315 aaKnown RBP18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 CAPN8A6NHC0 703 aa18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 PDIA4P13667 645 aaKnown RBP18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 CD38P28907 300 aa18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 GCLMP48507 274 aa18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 DNAJC3Q13217 504 aa18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 TRIP4Q15650 581 aaPredicted RBP18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 PRAMEF14Q5SWL7 426 aa18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 ADGRF1Q5T601 910 aa18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 HES3Q5TGS1 186 aa18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 INTS8Q75QN2 995 aaKnown RBP18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 PABPC3Q9H361 631 aaKnown RBP18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 FOXD4L1Q9NU39 408 aa18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 NUMA1Q14980 2115 aa18.08■□□□□ 0.48
CHMP4A-211ENST00000609024 TEX51A0A1B0GUA7 166 aa18.07■□□□□ 0.48
CHMP4A-211ENST00000609024 RNASEH2AO75792 299 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms