RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 PGRMC1O00264 195 aaKnown RBP11.53□□□□□ -0.56
CTCFL-214ENST00000608108 CREB3O43889 395 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 FGGP02679 453 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 C7P10643 843 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 CORO1AP31146 461 aaKnown RBP11.53□□□□□ -0.56
CTCFL-214ENST00000608108 LTBRP36941 435 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 CDKN2BP42772 138 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 COPS2P61201 443 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 MTA1Q13330 715 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 TUBB2AQ13885 445 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 PPP2R5EQ16537 467 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 TFDP3Q5H9I0 405 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 ATAT1Q5SQI0 421 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 CCDC181Q5TID7 509 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 GET4Q7L5D6 327 aaPredicted RBP11.53□□□□□ -0.56
CTCFL-214ENST00000608108 PLCD3Q8N3E9 789 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 RASGEF1CQ8N431 466 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 TTC16Q8NEE8 873 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 FAM71BQ8TC56 605 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 ACTRT1Q8TDG2 376 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 MYLIPQ8WY64 445 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 CDX2Q99626 313 aaPredicted RBP11.53□□□□□ -0.56
CTCFL-214ENST00000608108 ZNF670Q9BS34 389 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 TUBB2BQ9BVA1 445 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 OSBPL8Q9BZF1 889 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 OSBPL2Q9H1P3 480 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 S1PR5Q9H228 398 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 SMARCAL1Q9NZC9 954 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 OR12D3Q9UGF7 316 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 ARHGAP26Q9UNA1 814 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 CCL26Q9Y258 94 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 SNX10Q9Y5X0 201 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 HS3ST4Q9Y661 456 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 UNC80Q8N2C7 3258 aa11.53□□□□□ -0.56
CTCFL-214ENST00000608108 hCG_1818297A0A087WSY0 165 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 FAM72CH0Y354 149 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 PRAMEF12O95522 483 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 KRT10P13645 584 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 GOT1P17174 413 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 PTPN7P35236 360 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 ARL4AP40617 200 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 ZXDBP98169 803 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 MMRN1Q13201 1228 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 SEMA3BQ13214 749 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 CBX2Q14781 532 aaPredicted RBP11.52□□□□□ -0.57
CTCFL-214ENST00000608108 CLUL1Q15846 466 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 WHAMMP3Q1A5X7 153 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 MS4A13Q5J8X5 152 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 HABP4Q5JVS0 413 aaKnown RBP11.52□□□□□ -0.57
CTCFL-214ENST00000608108 FAM72AQ5TYM5 149 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 PIK3R6Q5UE93 754 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 KAZNQ674X7 775 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 FAM72DQ6L9T8 149 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 FAM72BQ86X60 149 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 VSIG1Q86XK7 387 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 DENND1CQ8IV53 801 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 NPAS3Q8IXF0 933 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 ADAMTS19Q8TE59 1207 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 TSC1Q92574 1164 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 FGF13Q92913 245 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 ZSWIM3Q96MP5 696 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 EPAS1Q99814 870 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 HERPUD2Q9BSE4 406 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 SIK2Q9H0K1 926 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 CWC15Q9P013 229 aaKnown RBP11.52□□□□□ -0.57
CTCFL-214ENST00000608108 CFAP97Q9P2B7 532 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 RCOR3Q9P2K3 495 aaPredicted RBP11.52□□□□□ -0.57
CTCFL-214ENST00000608108 RNF14Q9UBS8 474 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 TTC7AQ9ULT0 858 aaPredicted RBP11.52□□□□□ -0.57
CTCFL-214ENST00000608108 SH3BP1Q9Y3L3 701 aa11.52□□□□□ -0.57
CTCFL-214ENST00000608108 H3BRJ5 948 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 LEFTY2O00292 366 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 EEF2KO00418 725 aaKnown RBP11.51□□□□□ -0.57
CTCFL-214ENST00000608108 LRIG2O94898 1065 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 KLKB1P03952 638 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 FOSL2P15408 326 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 IL4RP24394 825 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 PAFAH1B1P43034 410 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 SLC11A2P49281 568 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 ZNF135P52742 658 aaPredicted RBP11.51□□□□□ -0.57
CTCFL-214ENST00000608108 TPI1P60174 286 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 CKAP4Q07065 602 aaKnown RBP11.51□□□□□ -0.57
CTCFL-214ENST00000608108 TAZQ16635 292 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 LONRF2Q1L5Z9 754 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 ANKRD20A8PQ5CZ79 823 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 RFX8Q6ZV50 586 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 ADAT2Q7Z6V5 191 aaKnown RBP11.51□□□□□ -0.57
CTCFL-214ENST00000608108 DDX42Q86XP3 938 aaKnown RBP eCLIP11.51□□□□□ -0.57
CTCFL-214ENST00000608108 SLC13A5Q86YT5 568 aaPredicted RBP11.51□□□□□ -0.57
CTCFL-214ENST00000608108 RFX6Q8HWS3 928 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 DEFB123Q8N688 67 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 SMRP1Q8NCR6 262 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 ZSCAN18Q8TBC5 510 aaPredicted RBP11.51□□□□□ -0.57
CTCFL-214ENST00000608108 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.51□□□□□ -0.57
CTCFL-214ENST00000608108 USP13Q92995 863 aaPredicted RBP11.51□□□□□ -0.57
CTCFL-214ENST00000608108 WBP2Q969T9 261 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 FAF2Q96CS3 445 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 MSLNLQ96KJ4 702 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 RIPOR3Q96MK2 946 aa11.51□□□□□ -0.57
CTCFL-214ENST00000608108 GUCD1Q96NT3 240 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms