RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	CACUL1	Q86Y37	369 aa		21.95	■■□□□ 1.1
NECAB3-222	ENST00000607805	HSCB	Q8IWL3	235 aa		21.95	■■□□□ 1.1
NECAB3-222	ENST00000607805	ZC3H3	Q8IXZ2	948 aa	Known RBP	21.95	■■□□□ 1.1
NECAB3-222	ENST00000607805	CCDC47	Q96A33	483 aa	Known RBP	21.95	■■□□□ 1.1
NECAB3-222	ENST00000607805	SPATA32	Q96LK8	384 aa		21.95	■■□□□ 1.1
NECAB3-222	ENST00000607805	C6orf106	Q9H6K1	298 aa	Predicted RBP	21.95	■■□□□ 1.1
NECAB3-222	ENST00000607805	OSGEP	Q9NPF4	335 aa		21.95	■■□□□ 1.1
NECAB3-222	ENST00000607805	ZDHHC9	Q9Y397	364 aa		21.95	■■□□□ 1.1
NECAB3-222	ENST00000607805	COL5A1	P20908	1838 aa	Predicted RBP	21.94	■■□□□ 1.1
NECAB3-222	ENST00000607805	SHROOM3	Q8TF72	1996 aa		21.94	■■□□□ 1.1
NECAB3-222	ENST00000607805	LATS1	O95835	1130 aa		21.94	■■□□□ 1.1
NECAB3-222	ENST00000607805	ACSL1	P33121	698 aa		21.94	■■□□□ 1.1
NECAB3-222	ENST00000607805	SCML4	Q8N228	414 aa		21.94	■■□□□ 1.1
NECAB3-222	ENST00000607805	UBR7	Q8N806	425 aa		21.94	■■□□□ 1.1
NECAB3-222	ENST00000607805	WFIKKN2	Q8TEU8	576 aa		21.94	■■□□□ 1.1
NECAB3-222	ENST00000607805	EEF2KMT	Q96G04	330 aa		21.94	■■□□□ 1.1
NECAB3-222	ENST00000607805	TSPAN16	Q9UKR8	245 aa		21.94	■■□□□ 1.1
NECAB3-222	ENST00000607805	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	21.94	■■□□□ 1.1
NECAB3-222	ENST00000607805		A0A1B0GVT2	93 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	YJEFN3	A6XGL0	299 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805		E7ENQ6	273 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	TSPAN3	O60637	253 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	HSP90AA1	P07900	732 aa	Known RBP	21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	HARS2	P49590	506 aa	Known RBP	21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	CSNK1E	P49674	416 aa	Known RBP	21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	BCAT1	P54687	386 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	ZNF445	P59923	1031 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	GOLGA7B	Q2TAP0	167 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	CBWD6	Q4V339	395 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	PKDCC	Q504Y2	493 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	CBWD3	Q5JTY5	395 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	CBWD5	Q5RIA9	395 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	ADGRF1	Q5T601	910 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	BSPRY	Q5W0U4	402 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	TMPRSS7	Q7RTY8	843 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	FAM124A	Q86V42	546 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	SETD7	Q8WTS6	366 aa	Known RBP	21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	CYB5D2	Q8WUJ1	264 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	ORAI3	Q9BRQ5	295 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	LHX5	Q9H2C1	402 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	GOLPH3L	Q9H4A5	285 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	SFMBT1	Q9UHJ3	866 aa		21.93	■■□□□ 1.1
NECAB3-222	ENST00000607805	PTPRQ	Q9UMZ3	2332 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	KALRN	O60229	2985 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	FLRT2	O43155	660 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	STX10	O60499	249 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	GABBR2	O75899	941 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	SGSH	P51688	502 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	AFF3	P51826	1226 aa	Known RBP	21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	SLC8A3	P57103	927 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	ADIG	Q0VDE8	80 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	BST2	Q10589	180 aa	Known RBP	21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	KIF19	Q2TAC6	998 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	CHST9	Q7L1S5	443 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	ZNF366	Q8N895	744 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	WFDC5	Q8TCV5	224 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	KCTD13	Q8WZ19	329 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	CCDC86	Q9H6F5	360 aa	Known RBP	21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	FBRS	Q9HAH7	460 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	PRSS16	Q9NQE7	514 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	ABCB8	Q9NUT2	735 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	DKK4	Q9UBT3	224 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805	BTBD3	Q9Y2F9	522 aa		21.92	■■□□□ 1.1
NECAB3-222	ENST00000607805		A0A1W2PQ27	194 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805		A0A1W2PQ64	194 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	IGLV3-27	P01718	113 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	ATXN1L	P0C7T5	689 aa	Known RBP	21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	RPS14	P62263	151 aa	Known RBP	21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	KRT85	P78386	507 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	ZBTB16	Q05516	673 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	CUL2	Q13617	745 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	SGO2	Q562F6	1265 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	MSANTD2	Q6P1R3	559 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	SMYD4	Q8IYR2	804 aa	Predicted RBP	21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	EDEM1	Q92611	657 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	TMA16	Q96EY4	203 aa	Known RBP	21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	LMLN	Q96KR4	655 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	CDC6	Q99741	560 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	IRX2	Q9BZI1	471 aa	Predicted RBP	21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	TM9SF3	Q9HD45	589 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	ABCC13	Q9NSE7	274 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	GGA2	Q9UJY4	613 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	PLA2G4C	Q9UP65	541 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805	SNX11	Q9Y5W9	270 aa		21.91	■■□□□ 1.1
NECAB3-222	ENST00000607805		O00370	1275 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	CETN3	O15182	167 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	GRIA4	P48058	902 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	DAOA	P59103	153 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	ARID5A	Q03989	594 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	ACAP1	Q15027	740 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	FNDC3B	Q53EP0	1204 aa	Known RBP	21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	MPP7	Q5T2T1	576 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	AHI1	Q8N157	1196 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	SPRYD3	Q8NCJ5	442 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	MDM1	Q8TC05	714 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	RHBDD1	Q8TEB9	315 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	BIRC7	Q96CA5	298 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	MYO19	Q96H55	970 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	LRRC4	Q9HBW1	653 aa		21.9	■■□□□ 1.1
NECAB3-222	ENST00000607805	CNGB3	Q9NQW8	809 aa		21.9	■■□□□ 1.1

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms