RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ARHGEF4Q9NR80 690 aa23.35■■□□□ 1.33
IRF3-228ENST00000601291 DNMT3BQ9UBC3 853 aaKnown RBP23.35■■□□□ 1.33
IRF3-228ENST00000601291 RHOP08100 348 aa23.34■■□□□ 1.33
IRF3-228ENST00000601291 RHOXF2BP0C7M4 288 aa23.34■■□□□ 1.33
IRF3-228ENST00000601291 HDCP19113 662 aa23.34■■□□□ 1.33
IRF3-228ENST00000601291 DDX6P26196 483 aaKnown RBP eCLIP23.34■■□□□ 1.33
IRF3-228ENST00000601291 COILP38432 576 aaPredicted RBP23.34■■□□□ 1.33
IRF3-228ENST00000601291 NRG1Q02297 640 aaPredicted RBP23.34■■□□□ 1.33
IRF3-228ENST00000601291 DHX34Q14147 1143 aaKnown RBP23.34■■□□□ 1.33
IRF3-228ENST00000601291 LRIT3Q3SXY7 679 aa23.34■■□□□ 1.33
IRF3-228ENST00000601291 ARHGAP15Q53QZ3 475 aa23.34■■□□□ 1.33
IRF3-228ENST00000601291 CCDC105Q8IYK2 499 aa23.34■■□□□ 1.33
IRF3-228ENST00000601291 RHOXF2Q9BQY4 288 aa23.34■■□□□ 1.33
IRF3-228ENST00000601291 LRRC1Q9BTT6 524 aa23.34■■□□□ 1.33
IRF3-228ENST00000601291 KLF16Q9BXK1 252 aaPredicted RBP23.34■■□□□ 1.33
IRF3-228ENST00000601291 PIDD1Q9HB75 910 aa23.34■■□□□ 1.33
IRF3-228ENST00000601291 HS3ST4Q9Y661 456 aa23.34■■□□□ 1.33
IRF3-228ENST00000601291 TRAV19A0A0A6YYK7 116 aa23.33■■□□□ 1.33
IRF3-228ENST00000601291 LRIG2O94898 1065 aa23.33■■□□□ 1.33
IRF3-228ENST00000601291 SRGAP2BP0DMP2 458 aa23.33■■□□□ 1.33
IRF3-228ENST00000601291 AMPD1P23109 780 aa23.33■■□□□ 1.33
IRF3-228ENST00000601291 DR1Q01658 176 aa23.33■■□□□ 1.33
IRF3-228ENST00000601291 OTUD4Q01804 1114 aaKnown RBP23.33■■□□□ 1.33
IRF3-228ENST00000601291 MLLT1Q03111 559 aaPredicted RBP23.33■■□□□ 1.33
IRF3-228ENST00000601291 SNX1Q13596 522 aa23.33■■□□□ 1.33
IRF3-228ENST00000601291 DPYSQ14117 519 aa23.33■■□□□ 1.33
IRF3-228ENST00000601291 DRICH1Q6PGQ1 229 aaPredicted RBP23.33■■□□□ 1.33
IRF3-228ENST00000601291 PLD5Q8N7P1 536 aa23.33■■□□□ 1.33
IRF3-228ENST00000601291 ARL14EPQ8N8R7 260 aaPredicted RBP23.33■■□□□ 1.33
IRF3-228ENST00000601291 ACTL9Q8TC94 416 aa23.33■■□□□ 1.33
IRF3-228ENST00000601291 GRK7Q8WTQ7 553 aa23.33■■□□□ 1.33
IRF3-228ENST00000601291 ZNF707Q96C28 371 aaPredicted RBP23.33■■□□□ 1.33
IRF3-228ENST00000601291 PCYOX1Q9UHG3 505 aa23.33■■□□□ 1.33
IRF3-228ENST00000601291 AMACRQ9UHK6 382 aa23.33■■□□□ 1.33
IRF3-228ENST00000601291 FEZ2Q9UHY8 353 aaPredicted RBP23.33■■□□□ 1.33
IRF3-228ENST00000601291 XPO7Q9UIA9 1087 aaKnown RBP23.33■■□□□ 1.33
IRF3-228ENST00000601291 SNX10Q9Y5X0 201 aa23.33■■□□□ 1.33
IRF3-228ENST00000601291 OBSL1O75147 1896 aa23.32■■□□□ 1.32
IRF3-228ENST00000601291 LIASO43766 372 aa23.32■■□□□ 1.32
IRF3-228ENST00000601291 CKMP06732 381 aa23.32■■□□□ 1.32
IRF3-228ENST00000601291 EPHB2P29323 1055 aa23.32■■□□□ 1.32
IRF3-228ENST00000601291 GGCXP38435 758 aa23.32■■□□□ 1.32
IRF3-228ENST00000601291 SLC11A2P49281 568 aa23.32■■□□□ 1.32
IRF3-228ENST00000601291 KCNQ1P51787 676 aa23.32■■□□□ 1.32
IRF3-228ENST00000601291 MLLT6P55198 1093 aaPredicted RBP23.32■■□□□ 1.32
IRF3-228ENST00000601291 PIK3R6Q5UE93 754 aa23.32■■□□□ 1.32
IRF3-228ENST00000601291 GPR161Q8N6U8 529 aaKnown RBP23.32■■□□□ 1.32
IRF3-228ENST00000601291 MAB21L3Q8N8X9 362 aa23.32■■□□□ 1.32
IRF3-228ENST00000601291 TBC1D31Q96DN5 1066 aa23.32■■□□□ 1.32
IRF3-228ENST00000601291 IGFLR1Q9H665 355 aa23.32■■□□□ 1.32
IRF3-228ENST00000601291 CHD9Q3L8U1 2897 aa23.32■■□□□ 1.32
IRF3-228ENST00000601291 ZNF197O14709 1029 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 MCF2LO15068 1137 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 FGF10O15520 208 aaPredicted RBP23.31■■□□□ 1.32
IRF3-228ENST00000601291 RAD51CO43502 376 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 STC2O76061 302 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 GJA1P17302 382 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 NR2C2P49116 596 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 RBM10P98175 930 aaKnown RBP23.31■■□□□ 1.32
IRF3-228ENST00000601291 LMNB2Q03252 620 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 BYSLQ13895 437 aaKnown RBP23.31■■□□□ 1.32
IRF3-228ENST00000601291 KCNC3Q14003 757 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 ELF2Q15723 593 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 MS4A13Q5J8X5 152 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 NCBP2-AS2Q69YL0 99 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 TTC27Q6P3X3 843 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 C1orf228Q6PIY5 440 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 LRRC31Q6UY01 552 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 SHKBP1Q8TBC3 707 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 SMG7Q92540 1137 aaKnown RBP23.31■■□□□ 1.32
IRF3-228ENST00000601291 CCDC114Q96M63 670 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 CYP2S1Q96SQ9 504 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 FAM118BQ9BPY3 351 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 SAE1Q9UBE0 346 aaPredicted RBP23.31■■□□□ 1.32
IRF3-228ENST00000601291 HEY1Q9Y5J3 304 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 TARSL2A2RTX5 802 aaKnown RBP23.31■■□□□ 1.32
IRF3-228ENST00000601291 SOBPA7XYQ1 873 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 E9PAM4 449 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 IRF1P10914 325 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 PECAM1P16284 738 aaPredicted RBP23.31■■□□□ 1.32
IRF3-228ENST00000601291 ERCC2P18074 760 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 CCR2P41597 374 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 SLC7A9P82251 487 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 NOMO1Q15155 1222 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 MANEALQ5VSG8 457 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 RWDD4Q6NW29 188 aaKnown RBP23.31■■□□□ 1.32
IRF3-228ENST00000601291 TMCO3Q6UWJ1 677 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 BZW1Q7L1Q6 419 aaKnown RBP23.31■■□□□ 1.32
IRF3-228ENST00000601291 GRASPQ7Z6J2 395 aaPredicted RBP23.31■■□□□ 1.32
IRF3-228ENST00000601291 VN1R2Q8NFZ6 395 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 ATL2Q8NHH9 583 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 NKD2Q969F2 451 aaPredicted RBP23.31■■□□□ 1.32
IRF3-228ENST00000601291 AZIN2Q96A70 460 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 SLC22A12Q96S37 553 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 CATSPERBQ9H7T0 1116 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 SMPD4Q9NXE4 827 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 ZMYM5Q9UJ78 669 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 CPQQ9Y646 472 aa23.31■■□□□ 1.32
IRF3-228ENST00000601291 ANAPC1Q9H1A4 1944 aa23.3■■□□□ 1.32
IRF3-228ENST00000601291 TMEM265A0A087WTH1 108 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms