RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 H3BQ06 376 aaPredicted RBP13.2□□□□□ -0.3
ZNF548-210ENST00000600442 NCAM2O15394 837 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 TTI1O43156 1089 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 IRAK2O43187 625 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 LIASO43766 372 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 CREB3O43889 395 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 LILRB3O75022 631 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 CNPP09543 421 aaKnown RBP13.2□□□□□ -0.3
ZNF548-210ENST00000600442 HARS2P49590 506 aaKnown RBP13.2□□□□□ -0.3
ZNF548-210ENST00000600442 ARSEP51690 589 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 VCPP55072 806 aaKnown RBP13.2□□□□□ -0.3
ZNF548-210ENST00000600442 TPI1P60174 286 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 EIF3EP60228 445 aaKnown RBP13.2□□□□□ -0.3
ZNF548-210ENST00000600442 COG7P83436 770 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 SLC7A5Q01650 507 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 RING1Q06587 406 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 TWF1Q12792 350 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 XRCC4Q13426 336 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 SNX1Q13596 522 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 LLGL1Q15334 1064 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 TRIP4Q15650 581 aaPredicted RBP13.2□□□□□ -0.3
ZNF548-210ENST00000600442 PUS10Q3MIT2 529 aaKnown RBP13.2□□□□□ -0.3
ZNF548-210ENST00000600442 ZC3H12AQ5D1E8 599 aaKnown RBP13.2□□□□□ -0.3
ZNF548-210ENST00000600442 SNX30Q5VWJ9 437 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 NUGGCQ68CJ6 796 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 EMBQ6PCB8 327 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 DARS2Q6PI48 645 aaKnown RBP13.2□□□□□ -0.3
ZNF548-210ENST00000600442 KLHDC10Q6PID8 442 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 JAMLQ86YT9 394 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 CDKL3Q8IVW4 592 aaPredicted RBP13.2□□□□□ -0.3
ZNF548-210ENST00000600442 TTC9BQ8N6N2 239 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 CCDC185Q8N715 623 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 GPR152Q8TDT2 470 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 POF1BQ8WVV4 589 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 PPP2R3CQ969Q6 453 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 LRRC45Q96CN5 670 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 DDX50Q9BQ39 737 aaKnown RBP13.2□□□□□ -0.3
ZNF548-210ENST00000600442 BRD8Q9H0E9 1235 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 PLEKHA4Q9H4M7 779 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 CATSPERBQ9H7T0 1116 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.2□□□□□ -0.3
ZNF548-210ENST00000600442 MTRF1LQ9UGC7 380 aaKnown RBP13.2□□□□□ -0.3
ZNF548-210ENST00000600442 ASIC3Q9UHC3 531 aa13.2□□□□□ -0.3
ZNF548-210ENST00000600442 TCRBV7S2A1N4TA0A589 114 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 HACD1B0YJ81 288 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 H7C0C1 242 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 SGK1O00141 431 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 FGF10O15520 208 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-210ENST00000600442 TLR5O60602 858 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 SOAT2O75908 522 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 IGLV3-25P01717 112 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 ZDHHC11BP0C7U3 371 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 ATF6P18850 670 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 TFE3P19532 575 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-210ENST00000600442 MX2P20592 715 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 ADCY8P40145 1251 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 ATP5OP48047 213 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 SLC11A2P49281 568 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 EFEMP1Q12805 493 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 GPM6BQ13491 265 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 NAA30Q147X3 362 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-210ENST00000600442 SIX1Q15475 284 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-210ENST00000600442 SLC9A4Q6AI14 798 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 CCNI2Q6ZMN8 369 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-210ENST00000600442 RFX8Q6ZV50 586 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 DNAJB7Q7Z6W7 309 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-210ENST00000600442 PCGF5Q86SE9 256 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 ACTL9Q8TC94 416 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 HDAC7Q8WUI4 952 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 AUTS2Q8WXX7 1259 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 PSMG2Q969U7 264 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 FAF2Q96CS3 445 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 BTN2A3PQ96KV6 586 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 C1orf74Q96LT6 269 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 KLHL5Q96PQ7 755 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 CSPG4P5Q96PW8 444 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 NMUR1Q9HB89 426 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 WDR6Q9NNW5 1121 aaKnown RBP13.19□□□□□ -0.3
ZNF548-210ENST00000600442 ALG13Q9NP73 1137 aaKnown RBP13.19□□□□□ -0.3
ZNF548-210ENST00000600442 GDF3Q9NR23 364 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 ARHGEF38Q9NXL2 777 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 OR12D3Q9UGF7 316 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 HEY1Q9Y5J3 304 aa13.19□□□□□ -0.3
ZNF548-210ENST00000600442 SLC12A8A0AV02 714 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 H3BNC9 293 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 PPP1R12AO14974 1030 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-210ENST00000600442 MTSS1O43312 755 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 ATP8B1O43520 1251 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 TGM5O43548 720 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 XYLBO75191 536 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 SEC24AO95486 1093 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 CD48P09326 243 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 H2AFXP16104 143 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-210ENST00000600442 PFKLP17858 780 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 ITIH2P19823 946 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 CDC25CP30307 473 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 USP46P62068 366 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 VSNL1P62760 191 aa13.18□□□□□ -0.3
ZNF548-210ENST00000600442 OTUD4Q01804 1114 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms