RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CHRNB1P11230 501 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 TYRP14679 529 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 PON2Q15165 354 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 C5orf22Q49AR2 442 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 MS4A13Q5J8X5 152 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 BRMS1LQ5PSV4 323 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 FSTL4Q6MZW2 842 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 ZNF852Q6ZMS4 543 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 C14orf80Q86SX3 495 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 FAM131BQ86XD5 332 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 SFTPA1Q8IWL2 248 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 CCDC170Q8IYT3 715 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 FNIP1Q8TF40 1166 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 PBXIP1Q96AQ6 731 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 CLDN23Q96B33 292 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 TRIM11Q96F44 468 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 BTN2A3PQ96KV6 586 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 PRICKLE1Q96MT3 831 aaPredicted RBP14.25□□□□□ -0.13
VRK3-219ENST00000600137 OSBPL6Q9BZF3 934 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 IRX2Q9BZI1 471 aaPredicted RBP14.25□□□□□ -0.13
VRK3-219ENST00000600137 TKTL2Q9H0I9 626 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 WDCPQ9H6R7 721 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 PLK2Q9NYY3 685 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 MYO1AQ9UBC5 1043 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 REXO2Q9Y3B8 237 aaKnown RBP14.25□□□□□ -0.13
VRK3-219ENST00000600137 HS3ST4Q9Y661 456 aa14.25□□□□□ -0.13
VRK3-219ENST00000600137 MYO18AQ92614 2054 aaKnown RBP14.24□□□□□ -0.13
VRK3-219ENST00000600137 FAM170BA6NMN3 283 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 PRR33A8MZF0 331 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 TULP3O75386 442 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 MOCS2O96007 188 aaPredicted RBP14.24□□□□□ -0.13
VRK3-219ENST00000600137 APOEP02649 317 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 H2AFZP0C0S5 128 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 TMEM253P0C7T8 217 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 AOC1P19801 751 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 TACR2P21452 398 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 HOXD9P28356 352 aaPredicted RBP14.24□□□□□ -0.13
VRK3-219ENST00000600137 RDXP35241 583 aaKnown RBP14.24□□□□□ -0.13
VRK3-219ENST00000600137 ADRA1BP35368 520 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 EIF2DP41214 584 aaKnown RBP14.24□□□□□ -0.13
VRK3-219ENST00000600137 SLC11A2P49281 568 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 CLCN5P51795 746 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 CCINQ13939 588 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 GAS6Q14393 721 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 CDO1Q16878 200 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 DCUN1D2Q6PH85 259 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 CYP4V2Q6ZWL3 525 aaPredicted RBP14.24□□□□□ -0.13
VRK3-219ENST00000600137 H2AFVQ71UI9 128 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 TMTC1Q8IUR5 882 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 CCDC105Q8IYK2 499 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 FBXL6Q8N531 539 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 NAT16Q8N8M0 369 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 ATP6V0D2Q8N8Y2 350 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 PJA1Q8NG27 643 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 FAM172AQ8WUF8 416 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 LMLNQ96KR4 655 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 NELL2Q99435 816 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 P2RY13Q9BPV8 354 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 LRFN3Q9BTN0 628 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 BBS2Q9BXC9 721 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 DEF6Q9H4E7 631 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 TMEM51Q9NW97 253 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 HCN2Q9UL51 889 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 SNX10Q9Y5X0 201 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 EPN1Q9Y6I3 576 aaPredicted RBP14.24□□□□□ -0.13
VRK3-219ENST00000600137 SCINQ9Y6U3 715 aa14.24□□□□□ -0.13
VRK3-219ENST00000600137 DOCK4Q8N1I0 1966 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 EIF3CLB5ME19 914 aaKnown RBP14.23□□□□□ -0.13
VRK3-219ENST00000600137 NEDD8-MDP1E9PL57 170 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 K7EQS6 105 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 GGCXP38435 758 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 IRAK1P51617 712 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 RPS24P62847 133 aaKnown RBP14.23□□□□□ -0.13
VRK3-219ENST00000600137 AUHQ13825 339 aaKnown RBP14.23□□□□□ -0.13
VRK3-219ENST00000600137 TCEAL1Q15170 157 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 ANO4Q32M45 955 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 MPPE1Q53F39 396 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 MPP7Q5T2T1 576 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 RAP1GAP2Q684P5 730 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 FBXL22Q6P050 247 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 C1orf228Q6PIY5 440 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 KIAA0907Q7Z7F0 614 aaPredicted RBP14.23□□□□□ -0.13
VRK3-219ENST00000600137 CCDC185Q8N715 623 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 TMEM105Q8N8V8 129 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 FLCNQ8NFG4 579 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 WFDC5Q8TCV5 224 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 CD101Q93033 1021 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 IGSF8Q969P0 613 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 TMA16Q96EY4 203 aaKnown RBP14.23□□□□□ -0.13
VRK3-219ENST00000600137 BTBD6Q96KE9 485 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 C1orf74Q96LT6 269 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 HAPLN3Q96S86 360 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 EIF3CQ99613 913 aaKnown RBP14.23□□□□□ -0.13
VRK3-219ENST00000600137 NUP85Q9BW27 656 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 C1QTNF1Q9BXJ1 281 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 MRPL47Q9HD33 250 aaKnown RBP14.23□□□□□ -0.13
VRK3-219ENST00000600137 RBM12Q9NTZ6 932 aaKnown RBP14.23□□□□□ -0.13
VRK3-219ENST00000600137 INTUQ9ULD6 942 aa14.23□□□□□ -0.13
VRK3-219ENST00000600137 NDRG2Q9UN36 371 aaKnown RBP14.23□□□□□ -0.13
VRK3-219ENST00000600137 TFR2Q9UP52 801 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms