RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 WNT6Q9Y6F9 365 aa13.11□□□□□ -0.31
CHMP2A-206ENST00000600118 ARNTLO00327 626 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 CHADO15335 359 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 MOCS2O96007 188 aaPredicted RBP13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 RARAP10276 462 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 SLC6A4P31645 630 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 SEMA3BQ13214 749 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 PDGFRLQ15198 375 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 CA9Q16790 459 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 EML3Q32P44 896 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 ERMARDQ5T6L9 678 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 ACBD5Q5T8D3 534 aaPredicted RBP13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 MANEALQ5VSG8 457 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 POLNQ7Z5Q5 900 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 NT5DC3Q86UY8 548 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 SYCE1Q8N0S2 351 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 SLC44A3Q8N4M1 653 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 TTC16Q8NEE8 873 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 TRIM44Q96DX7 344 aaPredicted RBP13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 SNRNP25Q9BV90 132 aaKnown RBP13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 TRMT61BQ9BVS5 477 aaKnown RBP13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 IRX2Q9BZI1 471 aaPredicted RBP13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 THG1LQ9NWX6 298 aaKnown RBP13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 DUS2Q9NX74 493 aaKnown RBP13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 COL6A3P12111 3177 aa13.1□□□□□ -0.31
CHMP2A-206ENST00000600118 GOLGA6L7A0A1B0GV03 622 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 PSTPIP1O43586 416 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 SPOPO43791 374 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 ASGR2P07307 311 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 IFNAR2P48551 515 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 ARSEP51690 589 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 GRM2Q14416 872 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 DPYSL2Q16555 572 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 HADHQ16836 314 aaKnown RBP13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 C5orf22Q49AR2 442 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 EFHC2Q5JST6 749 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 RNF43Q68DV7 783 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 C14orf80Q86SX3 495 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 RHOT1Q8IXI2 618 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 ADGRG2Q8IZP9 1017 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 C17orf53Q8N3J3 647 aaPredicted RBP13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 TRIM58Q8NG06 486 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 FAM71BQ8TC56 605 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 UBE2Q2Q8WVN8 375 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 MYEOVQ96EZ4 313 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 P2RY11Q96G91 374 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 ZFYVE19Q96K21 471 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 MAGEB5Q9BZ81 275 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 ZWILCHQ9H900 591 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 TRPV5Q9NQA5 729 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 HPS4Q9NQG7 708 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 GPATCH2LQ9NWQ4 482 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 AP4E1Q9UPM8 1137 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 SNX10Q9Y5X0 201 aa13.09□□□□□ -0.31
CHMP2A-206ENST00000600118 HELZP42694 1942 aaKnown RBP13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 IGLV3-10A0A075B6K4 115 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 DRGXA6NNA5 263 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 FAM72CH0Y354 149 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 FTCDO95954 541 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 KRT7P08729 469 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 ARSAP15289 507 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 TACR2P21452 398 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 CTNNA2P26232 953 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 GDI1P31150 447 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 L1CAMP32004 1257 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 CTNNA1P35221 906 aaKnown RBP13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 CHKAP35790 457 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 GGCXP38435 758 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 SSR1P43307 286 aaKnown RBP13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 AUHQ13825 339 aaKnown RBP13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 SMTNL2Q2TAL5 461 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 ATP13A4Q4VNC1 1196 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 KCNT1Q5JUK3 1230 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 FAM72AQ5TYM5 149 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 RAP1GAP2Q684P5 730 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 TRIM68Q6AZZ1 485 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 FAM72DQ6L9T8 149 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 FBXL22Q6P050 247 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 RHBDF2Q6PJF5 856 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 PEX26Q7Z412 305 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 CHSY1Q86X52 802 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 FAM72BQ86X60 149 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 YAF2Q8IY57 180 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 PYROXD2Q8N2H3 581 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 KRT35Q92764 455 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 IRF7Q92985 503 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 PRICKLE1Q96MT3 831 aaPredicted RBP13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 ALS2CR12Q96Q35 445 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 KCTD15Q96SI1 283 aaPredicted RBP13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 DDX50Q9BQ39 737 aaKnown RBP13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 SIK2Q9H0K1 926 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 SPHK2Q9NRA0 654 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 MARK1Q9P0L2 795 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 OR12D3Q9UGF7 316 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 AMFRQ9UKV5 643 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 NEU3Q9UQ49 428 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 KIF26AQ9ULI4 1882 aaPredicted RBP13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 C5orf42Q9H799 3197 aa13.08□□□□□ -0.32
CHMP2A-206ENST00000600118 OTOL1A6NHN0 477 aaPredicted RBP13.07□□□□□ -0.32
CHMP2A-206ENST00000600118 E9PAM4 449 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms