RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 SLC25A52Q3SY17 297 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 RAB6CQ53S08 254 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 HGSNATQ68CP4 663 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 MCOLN2Q8IZK6 566 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 ATP6V0D2Q8N8Y2 350 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 BTN2A3PQ96KV6 586 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 RAB6CQ9H0N0 254 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 ANLNQ9NQW6 1124 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 RRN3Q9NYV6 651 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 STIM2Q9P246 746 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 STAP1Q9ULZ2 295 aa15.78■□□□□ 0.12
LIG1-219ENST00000600055 LUC7L2Q9Y383 392 aaKnown RBP15.78■□□□□ 0.12
LIG1-219ENST00000600055 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.78■□□□□ 0.122e-7■■■□□ 14.8
LIG1-219ENST00000600055 TCRBV5S1A1TA0A578 114 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 ATG13O75143 517 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 ADCY5O95622 1261 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 PLEKP08567 350 aaPredicted RBP15.77■□□□□ 0.12
LIG1-219ENST00000600055 ABCB4P21439 1286 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 TACR2P21452 398 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 GSCP56915 257 aaPredicted RBP15.77■□□□□ 0.12
LIG1-219ENST00000600055 RPS24P62847 133 aaKnown RBP15.77■□□□□ 0.12
LIG1-219ENST00000600055 ATP11AP98196 1134 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 DEUP1Q05D60 604 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 C1QBPQ07021 282 aaKnown RBP15.77■□□□□ 0.12
LIG1-219ENST00000600055 GEN1Q17RS7 908 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 PREPLQ4J6C6 727 aaPredicted RBP15.77■□□□□ 0.12
LIG1-219ENST00000600055 TDRD12Q587J7 1177 aaKnown RBP15.77■□□□□ 0.12
LIG1-219ENST00000600055 MS4A13Q5J8X5 152 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 SPECC1LQ69YQ0 1117 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 CHSY1Q86X52 802 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 VSTM4Q8IW00 320 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 LGI2Q8N0V4 545 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 CFAP52Q8N1V2 620 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 ALLCQ8N6M5 410 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 WFDC5Q8TCV5 224 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 RXFP2Q8WXD0 754 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 SYN2Q92777 582 aaPredicted RBP15.77■□□□□ 0.12
LIG1-219ENST00000600055 IQCDQ96DY2 449 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 DDX50Q9BQ39 737 aaKnown RBP15.77■□□□□ 0.12
LIG1-219ENST00000600055 SELENOOQ9BVL4 669 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 TMPRSS4Q9NRS4 437 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 R4GN57 208 aa15.77■□□□□ 0.12
LIG1-219ENST00000600055 KIAA1549LQ6ZVL6 1849 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 C2CD4BA6NLJ0 364 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 I6L893 689 aaPredicted RBP15.76■□□□□ 0.11
LIG1-219ENST00000600055 PAPSS2O95340 614 aaPredicted RBP15.76■□□□□ 0.11
LIG1-219ENST00000600055 KLF8O95600 359 aaPredicted RBP15.76■□□□□ 0.11
LIG1-219ENST00000600055 SLC2A3P11169 496 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 KRT3P12035 628 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 PDGFRAP16234 1089 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 RRM1P23921 792 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 RFC1P35251 1148 aaPredicted RBP15.76■□□□□ 0.11
LIG1-219ENST00000600055 GGCXP38435 758 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 PXNP49023 591 aaPredicted RBP15.76■□□□□ 0.11
LIG1-219ENST00000600055 CXCR3P49682 368 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 MRPS21P82921 87 aaKnown RBP15.76■□□□□ 0.11
LIG1-219ENST00000600055 DMC1Q14565 340 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 PPP2R5DQ14738 602 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 C15orf59Q2T9L4 293 aaPredicted RBP15.76■□□□□ 0.11
LIG1-219ENST00000600055 CCDC14Q49A88 953 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 SH3PXD2AQ5TCZ1 1133 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 EGFLAMQ63HQ2 1017 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 HEATR6Q6AI08 1181 aaKnown RBP15.76■□□□□ 0.11
LIG1-219ENST00000600055 ARCQ7LC44 396 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 BNIPLQ7Z465 357 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 IL17RCQ8NAC3 791 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 TXNDC5Q8NBS9 432 aaKnown RBP15.76■□□□□ 0.11
LIG1-219ENST00000600055 C3orf20Q8ND61 904 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 PGAP3Q96FM1 320 aaPredicted RBP15.76■□□□□ 0.11
LIG1-219ENST00000600055 HHIPQ96QV1 700 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 PRMT1Q99873 361 aaKnown RBP15.76■□□□□ 0.11
LIG1-219ENST00000600055 TKTL2Q9H0I9 626 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 IRF2BPLQ9H1B7 796 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 SLC12A6Q9UHW9 1150 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 SLC8A2Q9UPR5 921 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 SLC27A6Q9Y2P4 619 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 SNX10Q9Y5X0 201 aa15.76■□□□□ 0.11
LIG1-219ENST00000600055 CACNA1IQ9P0X4 2223 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 SIGLEC16A6NMB1 481 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 SGK1O00141 431 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 ATMINO43313 823 aaPredicted RBP15.75■□□□□ 0.11
LIG1-219ENST00000600055 PAGE1O75459 146 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 FTLP02792 175 aaPredicted RBP15.75■□□□□ 0.11
LIG1-219ENST00000600055 SERPING1P05155 500 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 HNRNPLP14866 589 aaKnown RBP eCLIP15.75■□□□□ 0.11
LIG1-219ENST00000600055 HLA-FP30511 346 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 WASP42768 502 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 FNTBP49356 437 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 CDO1Q16878 200 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 ZNF528Q3MIS6 628 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 TMEM215Q68D42 235 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 RNF43Q68DV7 783 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 DNAJC24Q6P3W2 148 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 WDR59Q6PJI9 974 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 NUDT18Q6ZVK8 323 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 SYT13Q7L8C5 426 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 C14orf80Q86SX3 495 aa15.75■□□□□ 0.11
LIG1-219ENST00000600055 CIR1Q86X95 450 aaPredicted RBP15.75■□□□□ 0.11
LIG1-219ENST00000600055 ZNF513Q8N8E2 541 aaPredicted RBP15.75■□□□□ 0.11
LIG1-219ENST00000600055 HJURPQ8NCD3 748 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms