RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 UCMAQ8WVF2 138 aa29.23■■■□□ 2.27
ZNF558-206ENST00000599938 HMGB4Q8WW32 186 aa29.23■■■□□ 2.27
ZNF558-206ENST00000599938 PRICKLE1Q96MT3 831 aaPredicted RBP29.23■■■□□ 2.27
ZNF558-206ENST00000599938 IRX2Q9BZI1 471 aaPredicted RBP29.23■■■□□ 2.27
ZNF558-206ENST00000599938 NUCKS1Q9H1E3 243 aaKnown RBP29.23■■■□□ 2.27
ZNF558-206ENST00000599938 SYNJ2BP-COX16A0A087WUM0 186 aa29.22■■■□□ 2.27
ZNF558-206ENST00000599938 TYW5A2RUC4 315 aaKnown RBP29.22■■■□□ 2.27
ZNF558-206ENST00000599938 TBL1XO60907 577 aa29.22■■■□□ 2.27
ZNF558-206ENST00000599938 RETP07949 1114 aa29.22■■■□□ 2.27
ZNF558-206ENST00000599938 NOMO3P69849 1222 aa29.22■■■□□ 2.27
ZNF558-206ENST00000599938 EIF4HQ15056 248 aaKnown RBP29.22■■■□□ 2.27
ZNF558-206ENST00000599938 USP39Q53GS9 565 aaKnown RBP29.22■■■□□ 2.27
ZNF558-206ENST00000599938 NAA35Q5VZE5 725 aa29.22■■■□□ 2.27
ZNF558-206ENST00000599938 HJURPQ8NCD3 748 aaPredicted RBP29.22■■■□□ 2.27
ZNF558-206ENST00000599938 ZNF397Q8NF99 534 aaPredicted RBP29.22■■■□□ 2.27
ZNF558-206ENST00000599938 C18orf8Q96DM3 657 aa29.22■■■□□ 2.27
ZNF558-206ENST00000599938 GABRG3Q99928 467 aa29.22■■■□□ 2.27
ZNF558-206ENST00000599938 CIPCQ9C0C6 399 aa29.22■■■□□ 2.27
ZNF558-206ENST00000599938 COX16Q9P0S2 106 aa29.22■■■□□ 2.27
ZNF558-206ENST00000599938 XPO7Q9UIA9 1087 aaKnown RBP29.22■■■□□ 2.27
ZNF558-206ENST00000599938 HLA-FP30511 346 aa29.21■■■□□ 2.27
ZNF558-206ENST00000599938 GBP1P32455 592 aa29.21■■■□□ 2.27
ZNF558-206ENST00000599938 CDR2Q01850 454 aa29.21■■■□□ 2.27
ZNF558-206ENST00000599938 MPP7Q5T2T1 576 aa29.21■■■□□ 2.27
ZNF558-206ENST00000599938 PGBD3Q8N328 593 aa29.21■■■□□ 2.27
ZNF558-206ENST00000599938 BTN2A3PQ96KV6 586 aa29.21■■■□□ 2.27
ZNF558-206ENST00000599938 CEP250Q9BV73 2442 aa29.2■■■□□ 2.27
ZNF558-206ENST00000599938 DCLK1O15075 740 aa29.2■■■□□ 2.26
ZNF558-206ENST00000599938 GABRB2P47870 512 aa29.2■■■□□ 2.26
ZNF558-206ENST00000599938 FAM102AQ5T9C2 384 aaPredicted RBP29.2■■■□□ 2.26
ZNF558-206ENST00000599938 CHSY1Q86X52 802 aa29.2■■■□□ 2.26
ZNF558-206ENST00000599938 XYLT1Q86Y38 959 aa29.2■■■□□ 2.26
ZNF558-206ENST00000599938 WFIKKN2Q8TEU8 576 aa29.2■■■□□ 2.26
ZNF558-206ENST00000599938 CPA5Q8WXQ8 436 aa29.2■■■□□ 2.26
ZNF558-206ENST00000599938 ABCB8Q9NUT2 735 aa29.2■■■□□ 2.26
ZNF558-206ENST00000599938 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.2■■■□□ 2.26
ZNF558-206ENST00000599938 ELOVL2Q9NXB9 296 aa29.2■■■□□ 2.26
ZNF558-206ENST00000599938 STIM2Q9P246 746 aa29.2■■■□□ 2.26
ZNF558-206ENST00000599938 INVSQ9Y283 1065 aa29.2■■■□□ 2.26
ZNF558-206ENST00000599938 RAD54BQ9Y620 910 aa29.2■■■□□ 2.26
ZNF558-206ENST00000599938 A0A1W2PQF6 199 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 NPC1O15118 1278 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 SLC2A3P11169 496 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 CCR1P32246 355 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 NOS2P35228 1153 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 FMO1Q01740 532 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 ARID5AQ03989 594 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 EIF4EBP2Q13542 120 aaPredicted RBP29.19■■■□□ 2.26
ZNF558-206ENST00000599938 C2CD6Q53TS8 623 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 MS4A13Q5J8X5 152 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 RAP1GAP2Q684P5 730 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 RNF43Q68DV7 783 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 ATP6V0D2Q8N8Y2 350 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 ZNF557Q8N988 423 aaPredicted RBP29.19■■■□□ 2.26
ZNF558-206ENST00000599938 RNF34Q969K3 372 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 ERLEC1Q96DZ1 483 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 SLC12A6Q9UHW9 1150 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 GGA2Q9UJY4 613 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 USP18Q9UMW8 372 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 STON1Q9Y6Q2 735 aa29.19■■■□□ 2.26
ZNF558-206ENST00000599938 ZBTB24O43167 697 aaPredicted RBP29.18■■■□□ 2.26
ZNF558-206ENST00000599938 SCNN1AP37088 669 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 MATKP42679 507 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 RNASE9P60153 205 aaKnown RBP29.18■■■□□ 2.26
ZNF558-206ENST00000599938 RPS24P62847 133 aaKnown RBP29.18■■■□□ 2.26
ZNF558-206ENST00000599938 NME3Q13232 169 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 E2F5Q15329 346 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 ELF2Q15723 593 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 PLK5Q496M5 336 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 FILIP1LQ4L180 1135 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 TMEM215Q68D42 235 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 KIAA1211LQ6NV74 962 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 C11orf74Q86VG3 221 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 MFN1Q8IWA4 741 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 GPR161Q8N6U8 529 aaKnown RBP29.18■■■□□ 2.26
ZNF558-206ENST00000599938 DDX51Q8N8A6 666 aaKnown RBP eCLIP29.18■■■□□ 2.26
ZNF558-206ENST00000599938 WFDC5Q8TCV5 224 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 SORCS1Q8WY21 1168 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 MYEOVQ96EZ4 313 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 SPACA7Q96KW9 195 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 RTN4Q9NQC3 1192 aaKnown RBP29.18■■■□□ 2.26
ZNF558-206ENST00000599938 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP29.18■■■□□ 2.26
ZNF558-206ENST00000599938 THAP10Q9P2Z0 257 aaPredicted RBP29.18■■■□□ 2.26
ZNF558-206ENST00000599938 STAP1Q9ULZ2 295 aa29.18■■■□□ 2.26
ZNF558-206ENST00000599938 TEX33O43247 280 aa29.17■■■□□ 2.26
ZNF558-206ENST00000599938 PABPC1P11940 636 aaKnown RBP29.17■■■□□ 2.26
ZNF558-206ENST00000599938 CHRNB2P17787 502 aa29.17■■■□□ 2.26
ZNF558-206ENST00000599938 GABRG2P18507 467 aa29.17■■■□□ 2.26
ZNF558-206ENST00000599938 ABCB4P21439 1286 aa29.17■■■□□ 2.26
ZNF558-206ENST00000599938 TACR2P21452 398 aa29.17■■■□□ 2.26
ZNF558-206ENST00000599938 IL12RB1P42701 662 aa29.17■■■□□ 2.26
ZNF558-206ENST00000599938 SPEM2Q0P670 501 aa29.17■■■□□ 2.26
ZNF558-206ENST00000599938 STARD3Q14849 445 aa29.17■■■□□ 2.26
ZNF558-206ENST00000599938 IQCB1Q15051 598 aa29.17■■■□□ 2.26
ZNF558-206ENST00000599938 TRIM72Q6ZMU5 477 aa29.17■■■□□ 2.26
ZNF558-206ENST00000599938 CHST9Q7L1S5 443 aa29.17■■■□□ 2.26
ZNF558-206ENST00000599938 LGI2Q8N0V4 545 aa29.17■■■□□ 2.26
ZNF558-206ENST00000599938 AHI1Q8N157 1196 aa29.17■■■□□ 2.26
ZNF558-206ENST00000599938 OLIG1Q8TAK6 271 aa29.17■■■□□ 2.26
ZNF558-206ENST00000599938 ZC3H10Q96K80 434 aaKnown RBP29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms