RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 SERPINE1P05121 402 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 RPL21P46778 160 aaKnown RBP12.1□□□□□ -0.47
SCN8A-208ENST00000599343 TRAF3Q13114 568 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 GRTP1Q5TC63 336 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 TMEM169Q96HH4 297 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 NUDT12Q9BQG2 462 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 CIPCQ9C0C6 399 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 PHACTR1Q9C0D0 580 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 HACL1Q9UJ83 578 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 TMEM114B3SHH9 223 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 CNPP09543 421 aaKnown RBP12.1□□□□□ -0.47
SCN8A-208ENST00000599343 ERMARDQ5T6L9 678 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 TRMT11Q7Z4G4 463 aaKnown RBP12.1□□□□□ -0.47
SCN8A-208ENST00000599343 ZNF34Q8IZ26 560 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 FBXO39Q8N4B4 442 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 DGCR6LQ9BY27 220 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 KLHL28Q9NXS3 571 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 FAM153BP0C7A2 387 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 CDC25CP30307 473 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 SSTR1P30872 391 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 HK2P52789 917 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 IFI35P80217 286 aaPredicted RBP12.1□□□□□ -0.47
SCN8A-208ENST00000599343 TSNQ15631 228 aaKnown RBP12.1□□□□□ -0.47
SCN8A-208ENST00000599343 FAM153CQ494X1 144 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 ARMC3Q5W041 872 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 XRRA1Q6P2D8 792 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 SNX32Q86XE0 403 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 FBXO16Q8IX29 292 aaPredicted RBP12.1□□□□□ -0.47
SCN8A-208ENST00000599343 POMKQ9H5K3 350 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 A1CFQ9NQ94 594 aaKnown RBP12.1□□□□□ -0.47
SCN8A-208ENST00000599343 KIAA1257Q9ULG3 409 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 MYRFQ9Y2G1 1151 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 TIMM13Q9Y5L4 95 aaPredicted RBP12.1□□□□□ -0.47
SCN8A-208ENST00000599343 A0A0A6YYK5 440 aaPredicted RBP12.1□□□□□ -0.47
SCN8A-208ENST00000599343 GPR182O15218 404 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 CAMTA2O94983 1202 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 SUPT20HL2P0C7V6 817 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 GHRP10912 638 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 MAPK9P45984 424 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 PRKAA1Q13131 559 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 ZCCHC8Q6NZY4 707 aaKnown RBP12.1□□□□□ -0.47
SCN8A-208ENST00000599343 ERLEC1Q96DZ1 483 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 TBCDQ9BTW9 1192 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 ZNF518BQ9C0D4 1074 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 GANQ9H2C0 597 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 CCDC167Q9P0B6 97 aa12.1□□□□□ -0.47
SCN8A-208ENST00000599343 MYL12BO14950 172 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 AKAP3O75969 853 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 LBPP18428 481 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 MSH3P20585 1137 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 PAX7P23759 505 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 PTENP60484 403 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 MCL1Q07820 350 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 EIF2B5Q13144 721 aaKnown RBP12.09□□□□□ -0.47
SCN8A-208ENST00000599343 TAF5Q15542 800 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 CCDC153Q494R4 210 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 APOPT1Q96IL0 206 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 CDRT15Q96T59 188 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 PCDH9Q9HC56 1237 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 MCM8Q9UJA3 840 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 TMA7Q9Y2S6 64 aaKnown RBP12.09□□□□□ -0.47
SCN8A-208ENST00000599343 AGRPO00253 132 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 TNFAIP8O95379 198 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 EGFRP00533 1210 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 TSPAN19P0C672 248 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 CXCL8P10145 99 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 GZMAP12544 262 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 KLRK1P26718 216 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 PTPN11Q06124 597 aaPredicted RBP12.09□□□□□ -0.47
SCN8A-208ENST00000599343 PRMT9Q6P2P2 845 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 POMGNT2Q8NAT1 580 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 APOL4Q9BPW4 351 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 NINJ2Q9NZG7 142 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 MROH7Q68CQ1 1323 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 GAS2O43903 313 aaKnown RBP12.09□□□□□ -0.47
SCN8A-208ENST00000599343 KRT6AP02538 564 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 KRT6BP04259 564 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 CSF1RP07333 972 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 KRT6CP48668 564 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 NPY2RP49146 381 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 PKNOX1P55347 436 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 BOP1Q14137 746 aaKnown RBP12.09□□□□□ -0.47
SCN8A-208ENST00000599343 DGUOKQ16854 277 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 DEFB129Q9H1M3 183 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 TRPM5Q9NZQ8 1165 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 POLR1AO95602 1720 aaPredicted RBP12.09□□□□□ -0.47
SCN8A-208ENST00000599343 PCDH8O95206 1070 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 TOB1P50616 345 aaPredicted RBP12.09□□□□□ -0.47
SCN8A-208ENST00000599343 PLK1P53350 603 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 BST2Q10589 180 aaKnown RBP12.09□□□□□ -0.47
SCN8A-208ENST00000599343 TSHZ1Q6ZSZ6 1077 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 FBXO33Q7Z6M2 555 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 SAPCD2Q86UD0 394 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 WDR49Q8IV35 697 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 LINC00116Q8NCU8 138 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 LRRN4CLQ8ND94 238 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 ACER1Q8TDN7 264 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 UCMAQ8WVF2 138 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 KIFC1Q9BW19 673 aa12.09□□□□□ -0.47
SCN8A-208ENST00000599343 SENP6Q9GZR1 1112 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms