RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 TAC4Q86UU9 113 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 CACUL1Q86Y37 369 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 WDTC1Q8N5D0 677 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 CYB5D2Q8WUJ1 264 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 MRGPRX1Q96LB2 322 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 EDEM2Q9BV94 578 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 NDST4Q9H3R1 872 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 SAMSN1Q9NSI8 373 aaKnown RBP14.31□□□□□ -0.12
SCAF1-203ENST00000598359 TMEM74BQ9NUR3 256 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 ABCB8Q9NUT2 735 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 STIM2Q9P246 746 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 THAP10Q9P2Z0 257 aaPredicted RBP14.31□□□□□ -0.12
SCAF1-203ENST00000598359 XPO7Q9UIA9 1087 aaKnown RBP14.31□□□□□ -0.12
SCAF1-203ENST00000598359 STOML2Q9UJZ1 356 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 DNAJC12Q9UKB3 198 aa14.31□□□□□ -0.12
SCAF1-203ENST00000598359 PKD1L2Q7Z442 2459 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 IGHV1OR15-9A0A0B4J2B8 117 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 LNP1A1A4G5 178 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 GTPBP10A4D1E9 387 aaKnown RBP14.3□□□□□ -0.12
SCAF1-203ENST00000598359 FOXN3O00409 490 aaPredicted RBP14.3□□□□□ -0.12
SCAF1-203ENST00000598359 PES1O00541 588 aaKnown RBP14.3□□□□□ -0.12
SCAF1-203ENST00000598359 ACSL4O60488 711 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 FOXD2O60548 495 aaPredicted RBP14.3□□□□□ -0.12
SCAF1-203ENST00000598359 TBL1XO60907 577 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 HLA-EP13747 358 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 ITPKAP23677 461 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 ACADSBP45954 432 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 PDCLQ13371 301 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 VWA3BQ502W6 1294 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 PIK3R6Q5UE93 754 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 NUGGCQ68CJ6 796 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 RNF43Q68DV7 783 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 IL31Q6EBC2 164 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 DPY19L2P1Q6NXN4 242 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 TMEM110Q86TL2 294 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 ZNF366Q8N895 744 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 PDLIM2Q96JY6 352 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 PRICKLE1Q96MT3 831 aaPredicted RBP14.3□□□□□ -0.12
SCAF1-203ENST00000598359 CPXM1Q96SM3 734 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 TUBGCP2Q9BSJ2 902 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 SLC2A11Q9BYW1 496 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 PLCB1Q9NQ66 1216 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 FSCN3Q9NQT6 498 aa14.3□□□□□ -0.12
SCAF1-203ENST00000598359 ANKRD11Q6UB99 2663 aaPredicted RBP14.3□□□□□ -0.12
SCAF1-203ENST00000598359 SYNJ2BP-COX16A0A087WUM0 186 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 C4orf47A7E2U8 309 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 KCNJ18B7U540 433 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 CAPN9O14815 690 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 KHNYNO15037 678 aaKnown RBP14.29□□□□□ -0.12
SCAF1-203ENST00000598359 ZBTB24O43167 697 aaPredicted RBP14.29□□□□□ -0.12
SCAF1-203ENST00000598359 GRAP2O75791 330 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 LATS1O95835 1130 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 ERCC5P28715 1186 aaPredicted RBP14.29□□□□□ -0.12
SCAF1-203ENST00000598359 CD70P32970 193 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 CLCN1P35523 988 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 SLC11A2P49281 568 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 RPS24P62847 133 aaKnown RBP14.29□□□□□ -0.12
SCAF1-203ENST00000598359 IRX4P78413 519 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 RING1Q06587 406 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 KCNMA1Q12791 1236 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 BYSLQ13895 437 aaKnown RBP14.29□□□□□ -0.12
SCAF1-203ENST00000598359 KCNJ12Q14500 433 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 STARD3Q14849 445 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 ZC3H12AQ5D1E8 599 aaKnown RBP14.29□□□□□ -0.12
SCAF1-203ENST00000598359 LYSMD4Q5XG99 296 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 CHST9Q7L1S5 443 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 SLC47A2Q86VL8 602 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 FAM114A1Q8IWE2 563 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 UNC45BQ8IWX7 931 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 CFAP52Q8N1V2 620 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 C1orf131Q8NDD1 294 aaKnown RBP14.29□□□□□ -0.12
SCAF1-203ENST00000598359 STK32AQ8WU08 396 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 UCMAQ8WVF2 138 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 SLC39A13Q96H72 371 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 MKRN2Q9H000 416 aaKnown RBP14.29□□□□□ -0.12
SCAF1-203ENST00000598359 NUCKS1Q9H1E3 243 aaKnown RBP14.29□□□□□ -0.12
SCAF1-203ENST00000598359 COX16Q9P0S2 106 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 GGA2Q9UJY4 613 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 TLR6Q9Y2C9 796 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 NUP205Q92621 2012 aa14.29□□□□□ -0.12
SCAF1-203ENST00000598359 TM4SF5O14894 197 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 SART1O43290 800 aaKnown RBP14.28□□□□□ -0.12
SCAF1-203ENST00000598359 EPHX1P07099 455 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 NUMBP49757 651 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 LIMK1P53667 647 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 YWHAZP63104 245 aaKnown RBP14.28□□□□□ -0.12
SCAF1-203ENST00000598359 ARID5AQ03989 594 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 ENPP2Q13822 863 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 RAPGEF1Q13905 1077 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 EIF4HQ15056 248 aaKnown RBP14.28□□□□□ -0.12
SCAF1-203ENST00000598359 MEA1Q16626 185 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 FNDC3BQ53EP0 1204 aaKnown RBP14.28□□□□□ -0.12
SCAF1-203ENST00000598359 TRIM61Q5EBN2 209 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 SERPINA13PQ6UXR4 307 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 MMS22LQ6ZRQ5 1243 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 ADIPOR2Q86V24 386 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 SLC41A1Q8IVJ1 513 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 PPP1R13BQ96KQ4 1090 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 FAM81BQ96LP2 452 aa14.28□□□□□ -0.12
SCAF1-203ENST00000598359 SERPINB11Q96P15 392 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms