RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 I3L4J1 428 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 RNF103O00237 685 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 GSC2O15499 205 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 CREB3O43889 395 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 HUS1O60921 280 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 GSRP00390 522 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 BPGMP07738 259 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 MGAT1P26572 445 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 SESN2P58004 480 aaPredicted RBP20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 C4orf50Q6ZRC1 276 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 ZCCHC23Q6ZST2 131 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 HFE2Q6ZVN8 426 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 BNIPLQ7Z465 357 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 PLEKHH3Q7Z736 793 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.2■□□□□ 0.827e-7■■□□□ 12.7
GRAMD1A-207ENST00000598118 RNF169Q8NCN4 708 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 SMG8Q8ND04 991 aaKnown RBP20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 NT5C3BQ969T7 300 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 HNRNPABQ99729 332 aaKnown RBP20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 TAS2R1Q9NYW7 299 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 CACNG4Q9UBN1 327 aa20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 MARCOQ9UEW3 520 aaPredicted RBP20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 GNEQ9Y223 722 aaKnown RBP20.2■□□□□ 0.82
GRAMD1A-207ENST00000598118 KITP10721 976 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 AXLP30530 894 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 FDFT1P37268 417 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 PNPLA4P41247 253 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 SERPINB9P50453 376 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 IRX4P78413 519 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 NIPAL4Q0D2K0 466 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 PCBP1Q15365 356 aaKnown RBP eCLIP20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 ATG16L1Q676U5 607 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 LRRC8BQ6P9F7 803 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 TIFABQ6ZNK6 161 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 CYS1Q717R9 158 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 PGLYRP2Q96PD5 576 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 NPY6RQ99463 290 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 IL1RAPL1Q9NZN1 696 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 IPPQ9Y573 584 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 PSAT1Q9Y617 370 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 DNAH12Q6ZR08 3092 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 SNNO75324 88 aaPredicted RBP20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 DAB1O75553 588 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 ALDOAP04075 364 aaKnown RBP20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 MLNP12872 115 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 PSMB4P28070 264 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 GTF2A2P52657 109 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 SARNPP82979 210 aaKnown RBP20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 WASHC5Q12768 1159 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 OLIG2Q13516 323 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 MFSD10Q14728 455 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 KRT72Q14CN4 511 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 SV2CQ496J9 727 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 KIAA0319Q5VV43 1072 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 BSPRYQ5W0U4 402 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 C16orf46Q6P387 395 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 TRIM42Q8IWZ5 723 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 ENDOVQ8N8Q3 282 aaKnown RBP20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 TNIP3Q96KP6 325 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 PRDM12Q9H4Q4 367 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 GEMIN8Q9NWZ8 242 aaKnown RBP20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 KCNK4Q9NYG8 393 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 SEPT10Q9P0V9 454 aa20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 RCOR3Q9P2K3 495 aaPredicted RBP20.19■□□□□ 0.82
GRAMD1A-207ENST00000598118 SDR42E2A6NKP2 422 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 M0QYT0 321 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 NME3Q13232 169 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 KHDC1Q4VXA5 237 aaKnown RBP20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 MARK2Q7KZI7 788 aaKnown RBP20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 ANKRD23Q86SG2 305 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 TUBB6Q9BUF5 446 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 PIGVQ9NUD9 493 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 EMCNQ9ULC0 261 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 GYG2O15488 501 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 AMHP03971 560 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 NPR3P17342 541 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 WARSP23381 471 aaKnown RBP20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 NOS2P35228 1153 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 CLNS1AP54105 237 aaKnown RBP20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 WSCD1Q658N2 575 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 CLEC20AQ6ZU45 233 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 TREML1Q86YW5 311 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 ZNF567Q8N184 647 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 CCNYQ8ND76 341 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 PTPN18Q99952 460 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 ANLNQ9NQW6 1124 aa20.18■□□□□ 0.82
GRAMD1A-207ENST00000598118 FAM72CH0Y354 149 aa20.17■□□□□ 0.82
GRAMD1A-207ENST00000598118 I6L893 689 aaPredicted RBP20.17■□□□□ 0.82
GRAMD1A-207ENST00000598118 ESRRAP11474 423 aaPredicted RBP20.17■□□□□ 0.82
GRAMD1A-207ENST00000598118 PTPN1P18031 435 aaKnown RBP20.17■□□□□ 0.82
GRAMD1A-207ENST00000598118 CPA2P48052 419 aa20.17■□□□□ 0.82
GRAMD1A-207ENST00000598118 GLUD2P49448 558 aa20.17■□□□□ 0.82
GRAMD1A-207ENST00000598118 FAM72AQ5TYM5 149 aa20.17■□□□□ 0.82
GRAMD1A-207ENST00000598118 OLFML2BQ68BL8 750 aa20.17■□□□□ 0.82
GRAMD1A-207ENST00000598118 FAM72DQ6L9T8 149 aa20.17■□□□□ 0.82
GRAMD1A-207ENST00000598118 CES3Q6UWW8 571 aa20.17■□□□□ 0.82
GRAMD1A-207ENST00000598118 PACS1Q6VY07 963 aa20.17■□□□□ 0.82
GRAMD1A-207ENST00000598118 BZW1Q7L1Q6 419 aaKnown RBP20.17■□□□□ 0.82
GRAMD1A-207ENST00000598118 FAM72BQ86X60 149 aa20.17■□□□□ 0.82
GRAMD1A-207ENST00000598118 HACE1Q8IYU2 909 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms