RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 BTBD8Q5XKL5 378 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 RNF43Q68DV7 783 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 C11orf63Q6NUN7 778 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 RSRC2Q7L4I2 434 aaKnown RBP12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 GRASPQ7Z6J2 395 aaPredicted RBP12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 DAAM2Q86T65 1068 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 MON1AQ86VX9 555 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 EMC1Q8N766 993 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 TRIM58Q8NG06 486 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 JOSD2Q8TAC2 188 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 OVCA2Q8WZ82 227 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 NDRG1Q92597 394 aaKnown RBP12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 GCNAQ96QF7 691 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 PLA2G2FQ9BZM2 168 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 SMOC1Q9H4F8 434 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 LMAN1LQ9HAT1 526 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 ABCC13Q9NSE7 274 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 IL37Q9NZH6 218 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 IP6K2Q9UHH9 426 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 MSRB2Q9Y3D2 182 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 HECTD1Q9ULT8 2610 aa12.56□□□□□ -0.4
SHKBP1-213ENST00000597325 A0A1W2PQH9 124 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 FAM92AA1XBS5 289 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 TMEM191CA6NGB0 347 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 FGF19O95750 216 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 ABL1P00519 1130 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 RALAP11233 206 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 NCAM1P13591 858 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 CEACAM1P13688 526 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 PDGFRAP16234 1089 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 RFC1P35251 1148 aaPredicted RBP12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 MATKP42679 507 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 PPP3CCP48454 512 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 RPL7AP62424 266 aaKnown RBP12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 PIGHQ14442 188 aaPredicted RBP12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 MESDQ14696 234 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 TAF5Q15542 800 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 COL28A1Q2UY09 1125 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 DCAF6Q58WW2 860 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 ZNF569Q5MCW4 686 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 BSPRYQ5W0U4 402 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 ARCQ7LC44 396 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 DNAJB7Q7Z6W7 309 aaPredicted RBP12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 TADA2BQ86TJ2 420 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 TPCN2Q8NHX9 752 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 ITFG1Q8TB96 612 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 FNIP1Q8TF40 1166 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 RNF139Q8WU17 664 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 MYRFLQ96LU7 910 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 CDK5RAP1Q96SZ6 601 aaKnown RBP12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 ASAH2Q9NR71 780 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 TRPM5Q9NZQ8 1165 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 SALL4Q9UJQ4 1053 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 TMEM59LQ9UK28 342 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 CAPN6Q9Y6Q1 641 aa12.55□□□□□ -0.4
SHKBP1-213ENST00000597325 GRID2IPA4D2P6 1211 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 C2CD4BA6NLJ0 364 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 KIF2AO00139 706 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 MAN2B1O00754 1011 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 DPYSL4O14531 572 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 SPOPO43791 374 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 BUB1BO60566 1050 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 ECI2O75521 394 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 PALMO75781 387 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 RNF8O76064 485 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 POU2F2P09086 479 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 CHRNB1P11230 501 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 HMGA1P17096 107 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 HOXC13P31276 330 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 MAN1A1P33908 653 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 NOS2P35228 1153 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 FLT3P36888 993 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 PTPN9P43378 593 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 SULT1E1P49888 294 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 ZNF143P52747 638 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 PABPC1LQ4VXU2 614 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 POTEHQ6S545 545 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 CEP68Q76N32 757 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 BEND5Q7L4P6 421 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 BHLHA9Q7RTU4 235 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 DEFB106AQ8N104 65 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 SPEM1Q8N4L4 309 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 LEMD2Q8NC56 503 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 RXFP2Q8WXD0 754 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 EDEM1Q92611 657 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 DNASE1L2Q92874 299 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 BTBD6Q96KE9 485 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 C16orf45Q96MC5 204 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 SLC2A13Q96QE2 648 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 NCAPGQ9BPX3 1015 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 CORO1BQ9BR76 489 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 CNPY3Q9BT09 278 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 TRIM7Q9C029 511 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 NACA2Q9H009 215 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 FAM204AQ9H8W3 233 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 OLA1Q9NTK5 396 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 RRN3Q9NYV6 651 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 CLIC5Q9NZA1 410 aa12.54□□□□□ -0.4
SHKBP1-213ENST00000597325 MYO18BQ8IUG5 2567 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms