RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 OTUD1Q5VV17 481 aaPredicted RBP21.88■■□□□ 1.09
PNKP-209ENST00000596726 RASSF3Q86WH2 238 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 TSTD1Q8NFU3 115 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 MYEOVQ96EZ4 313 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 BTN2A3PQ96KV6 586 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 PRICKLE1Q96MT3 831 aaPredicted RBP21.88■■□□□ 1.09
PNKP-209ENST00000596726 NPY6RQ99463 290 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 NUCKS1Q9H1E3 243 aaKnown RBP21.88■■□□□ 1.09
PNKP-209ENST00000596726 FAM204AQ9H8W3 233 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 DDIT4Q9NX09 232 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.88■■□□□ 1.09
PNKP-209ENST00000596726 TMEM59LQ9UK28 342 aa21.88■■□□□ 1.09
PNKP-209ENST00000596726 PTPRZ1P23471 2315 aaPredicted RBP21.88■■□□□ 1.09
PNKP-209ENST00000596726 FAM170AA1A519 330 aa21.87■■□□□ 1.09
PNKP-209ENST00000596726 AXIN1O15169 862 aa21.87■■□□□ 1.09
PNKP-209ENST00000596726 MOCS2O96007 188 aaPredicted RBP21.87■■□□□ 1.09
PNKP-209ENST00000596726 FERP16591 822 aa21.87■■□□□ 1.09
PNKP-209ENST00000596726 NTSR1P30989 418 aa21.87■■□□□ 1.09
PNKP-209ENST00000596726 MS4A13Q5J8X5 152 aa21.87■■□□□ 1.09
PNKP-209ENST00000596726 FAM102AQ5T9C2 384 aaPredicted RBP21.87■■□□□ 1.09
PNKP-209ENST00000596726 ARCQ7LC44 396 aa21.87■■□□□ 1.09
PNKP-209ENST00000596726 IRF2BP2Q7Z5L9 587 aa21.87■■□□□ 1.09
PNKP-209ENST00000596726 ANKS1BQ7Z6G8 1248 aa21.87■■□□□ 1.09
PNKP-209ENST00000596726 KIAA0907Q7Z7F0 614 aaPredicted RBP21.87■■□□□ 1.09
PNKP-209ENST00000596726 ATP6V0D2Q8N8Y2 350 aa21.87■■□□□ 1.09
PNKP-209ENST00000596726 ACOX2Q99424 681 aa21.87■■□□□ 1.09
PNKP-209ENST00000596726 ADAM33Q9BZ11 813 aa21.87■■□□□ 1.09
PNKP-209ENST00000596726 CALCOCO1Q9P1Z2 691 aa21.87■■□□□ 1.09
PNKP-209ENST00000596726 SMG5Q9UPR3 1016 aaKnown RBP21.87■■□□□ 1.09
PNKP-209ENST00000596726 EP300Q09472 2414 aaPredicted RBP21.86■■□□□ 1.09
PNKP-209ENST00000596726 M0QYT0 321 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 TBL1XO60907 577 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 SLC2A3P11169 496 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 HLA-FP30511 346 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 CCR1P32246 355 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 RNASE9P60153 205 aaKnown RBP21.86■■□□□ 1.09
PNKP-209ENST00000596726 CENPCQ03188 943 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 PTP4A2Q12974 167 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 CLEC16AQ2KHT3 1053 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 TMEM215Q68D42 235 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.86■■□□□ 1.09
PNKP-209ENST00000596726 HJURPQ8NCD3 748 aaPredicted RBP21.86■■□□□ 1.09
PNKP-209ENST00000596726 SLC30A5Q8TAD4 765 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 GAB3Q8WWW8 586 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 PGAP3Q96FM1 320 aaPredicted RBP21.86■■□□□ 1.09
PNKP-209ENST00000596726 GABRG3Q99928 467 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 AGPAT1Q99943 283 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 TTYH3Q9C0H2 523 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 ZNF292O60281 2723 aa21.86■■□□□ 1.09
PNKP-209ENST00000596726 SYNJ2BP-COX16A0A087WUM0 186 aa21.85■■□□□ 1.09
PNKP-209ENST00000596726 CCDC172P0C7W6 258 aa21.85■■□□□ 1.09
PNKP-209ENST00000596726 TFE3P19532 575 aaPredicted RBP21.85■■□□□ 1.09
PNKP-209ENST00000596726 TACR2P21452 398 aa21.85■■□□□ 1.09
PNKP-209ENST00000596726 PBX1P40424 430 aa21.85■■□□□ 1.09
PNKP-209ENST00000596726 SIM2Q14190 667 aaPredicted RBP21.85■■□□□ 1.09
PNKP-209ENST00000596726 EIF4HQ15056 248 aaKnown RBP21.85■■□□□ 1.09
PNKP-209ENST00000596726 TRNP1Q6NT89 227 aa21.85■■□□□ 1.09
PNKP-209ENST00000596726 MMS22LQ6ZRQ5 1243 aa21.85■■□□□ 1.09
PNKP-209ENST00000596726 WFDC5Q8TCV5 224 aa21.85■■□□□ 1.09
PNKP-209ENST00000596726 PRMT1Q99873 361 aaKnown RBP21.85■■□□□ 1.09
PNKP-209ENST00000596726 SYT11Q9BT88 431 aa21.85■■□□□ 1.09
PNKP-209ENST00000596726 EDEM3Q9BZQ6 932 aa21.85■■□□□ 1.09
PNKP-209ENST00000596726 CD248Q9HCU0 757 aa21.85■■□□□ 1.09
PNKP-209ENST00000596726 POLMQ9NP87 494 aaPredicted RBP21.85■■□□□ 1.09
PNKP-209ENST00000596726 ELOVL2Q9NXB9 296 aa21.85■■□□□ 1.09
PNKP-209ENST00000596726 COX16Q9P0S2 106 aa21.85■■□□□ 1.09
PNKP-209ENST00000596726 THAP10Q9P2Z0 257 aaPredicted RBP21.85■■□□□ 1.09
PNKP-209ENST00000596726 SLC12A6Q9UHW9 1150 aa21.85■■□□□ 1.09
PNKP-209ENST00000596726 STAP1Q9ULZ2 295 aa21.85■■□□□ 1.09
PNKP-209ENST00000596726 A0A1W2PQF6 199 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 GOLGA6L19H0YKK7 550 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 GOLGA8SH3BPF8 625 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 NPC1O15118 1278 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 TIMM44O43615 452 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 FLT3P36888 993 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 WASP42768 502 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 GSCP56915 257 aaPredicted RBP21.84■■□□□ 1.09
PNKP-209ENST00000596726 RPS24P62847 133 aaKnown RBP21.84■■□□□ 1.09
PNKP-209ENST00000596726 NME3Q13232 169 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 ENPP2Q13822 863 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 SLC25A52Q3SY17 297 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 FIGNQ5HY92 759 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 RAP1GAP2Q684P5 730 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 BNIPLQ7Z465 357 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 PHF13Q86YI8 300 aaPredicted RBP21.84■■□□□ 1.09
PNKP-209ENST00000596726 CHPFQ8IZ52 775 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 MDGA1Q8NFP4 955 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 OLIG1Q8TAK6 271 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 FIBINQ8TAL6 211 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 WFIKKN2Q8TEU8 576 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 RUBCNQ92622 972 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 LMLNQ96KR4 655 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 PIGVQ9NUD9 493 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 TMEM51Q9NW97 253 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 PLXND1Q9Y4D7 1925 aa21.84■■□□□ 1.09
PNKP-209ENST00000596726 CFAP54Q96N23 3096 aa21.83■■□□□ 1.09
PNKP-209ENST00000596726 LRRC53A6NM62 1247 aa21.83■■□□□ 1.09
PNKP-209ENST00000596726 RPP40O75818 363 aaKnown RBP21.83■■□□□ 1.09
PNKP-209ENST00000596726 ALDH1A2O94788 518 aa21.83■■□□□ 1.09
PNKP-209ENST00000596726 HOXB2P14652 356 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms