RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 FAM217AQ8IXS0 508 aa16.07■□□□□ 0.16
SMCO4-206ENST00000596676 CFAP52Q8N1V2 620 aa16.07■□□□□ 0.16
SMCO4-206ENST00000596676 CHFRQ96EP1 664 aa16.07■□□□□ 0.16
SMCO4-206ENST00000596676 BTN2A3PQ96KV6 586 aa16.07■□□□□ 0.16
SMCO4-206ENST00000596676 PRICKLE1Q96MT3 831 aaPredicted RBP16.07■□□□□ 0.16
SMCO4-206ENST00000596676 PRMT1Q99873 361 aaKnown RBP16.07■□□□□ 0.16
SMCO4-206ENST00000596676 ECT2Q9H8V3 914 aa16.07■□□□□ 0.16
SMCO4-206ENST00000596676 ZWILCHQ9H900 591 aa16.07■□□□□ 0.16
SMCO4-206ENST00000596676 LUC7LQ9NQ29 371 aaKnown RBP16.07■□□□□ 0.16
SMCO4-206ENST00000596676 FZD10Q9ULW2 581 aa16.07■□□□□ 0.16
SMCO4-206ENST00000596676 DUSP12Q9UNI6 340 aa16.07■□□□□ 0.16
SMCO4-206ENST00000596676 SORCS3Q9UPU3 1222 aa16.07■□□□□ 0.16
SMCO4-206ENST00000596676 PPP2R2CQ9Y2T4 447 aa16.07■□□□□ 0.16
SMCO4-206ENST00000596676 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
SMCO4-206ENST00000596676 COL4A2P08572 1712 aa16.07■□□□□ 0.16
SMCO4-206ENST00000596676 TRIOO75962 3097 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 A0A0A6YYK5 440 aaPredicted RBP16.06■□□□□ 0.16
SMCO4-206ENST00000596676 TRIM24O15164 1050 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 RNF8O76064 485 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 SLC34A2O95436 690 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 SRFP11831 508 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 TACR2P21452 398 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 GJC1P36383 396 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 SLC6A11P48066 632 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 MESP2Q0VG99 397 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 PIGHQ14442 188 aaPredicted RBP16.06■□□□□ 0.16
SMCO4-206ENST00000596676 PDGFRLQ15198 375 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 SMTNL2Q2TAL5 461 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 KCNT1Q5JUK3 1230 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 ADGRF1Q5T601 910 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 C12orf40Q86WS4 652 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 CHSY1Q86X52 802 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 LGI2Q8N0V4 545 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 NAT16Q8N8M0 369 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 NIPA2Q8N8Q9 360 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 TPCN2Q8NHX9 752 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 IGSF8Q969P0 613 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 SNRNP25Q9BV90 132 aaKnown RBP16.06■□□□□ 0.16
SMCO4-206ENST00000596676 LZTFL1Q9NQ48 299 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 SPHK2Q9NRA0 654 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 TBC1D14Q9P2M4 693 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 STOML2Q9UJZ1 356 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 CA14Q9ULX7 337 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 CLEC4EQ9ULY5 219 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 VCANP13611 3396 aa16.06■□□□□ 0.16
SMCO4-206ENST00000596676 SHISA7A6NL88 538 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 BTNL10A8MVZ5 291 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 SLC9A3R1O14745 358 aaPredicted RBP16.05■□□□□ 0.16
SMCO4-206ENST00000596676 CCDC175P0C221 793 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 SLC2A3P11169 496 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 TNNT1P13805 278 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 HADHBP55084 474 aaKnown RBP16.05■□□□□ 0.16
SMCO4-206ENST00000596676 MLLT6P55198 1093 aaPredicted RBP16.05■□□□□ 0.16
SMCO4-206ENST00000596676 NAP1L1P55209 391 aaKnown RBP16.05■□□□□ 0.16
SMCO4-206ENST00000596676 RPS24P62847 133 aaKnown RBP16.05■□□□□ 0.16
SMCO4-206ENST00000596676 KIF5AQ12840 1032 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 AUHQ13825 339 aaKnown RBP16.05■□□□□ 0.16
SMCO4-206ENST00000596676 ANO4Q32M45 955 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 ITPRIPL2Q3MIP1 535 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 FBXL22Q6P050 247 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 SLFN11Q7Z7L1 901 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 ZNF683Q8IZ20 524 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 IRF7Q92985 503 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 ATP2A3Q93084 1043 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 AZIN2Q96A70 460 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 SLC2A4RGQ9NR83 387 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 KLHL11Q9NVR0 708 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 TRMT1Q9NXH9 659 aaKnown RBP16.05■□□□□ 0.16
SMCO4-206ENST00000596676 STIM2Q9P246 746 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 SLC12A6Q9UHW9 1150 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 VANGL2Q9ULK5 521 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 USP18Q9UMW8 372 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 GUCA1BQ9UMX6 200 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 ZNF510Q9Y2H8 683 aa16.05■□□□□ 0.16
SMCO4-206ENST00000596676 GRID2IPA4D2P6 1211 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 KRBA1A5PL33 1030 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 ANTXRLA6NF34 631 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 USP27XA6NNY8 438 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 NEDD8-MDP1E9PL57 170 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 NRDCO43847 1150 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 TBL1XO60907 577 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 SRGAP2O75044 1071 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 CNTN5O94779 1100 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 NFATC1O95644 943 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 CD72P21854 359 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 COMTP21964 271 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 GJA4P35212 333 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 NUMBP49757 651 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 SLC25A11Q02978 314 aaKnown RBP16.04■□□□□ 0.16
SMCO4-206ENST00000596676 SLC44A4Q53GD3 710 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 FYB2Q5VWT5 728 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 ASTLQ6HA08 431 aaPredicted RBP16.04■□□□□ 0.16
SMCO4-206ENST00000596676 TXNDC11Q6PKC3 985 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 SFTPA1Q8IWL2 248 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 C17orf53Q8N3J3 647 aaPredicted RBP16.04■□□□□ 0.16
SMCO4-206ENST00000596676 CPXM2Q8N436 756 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 CSGALNACT1Q8TDX6 532 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 HSPH1Q92598 858 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 HAPLN3Q96S86 360 aa16.04■□□□□ 0.16
SMCO4-206ENST00000596676 KCTD15Q96SI1 283 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms