RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 COX16Q9P0S2 106 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 TBC1D14Q9P2M4 693 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 ZNF212Q9UDV6 495 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 TRIM10Q9UDY6 481 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 STAP1Q9ULZ2 295 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 SH3BP1Q9Y3L3 701 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 MTF2Q9Y483 593 aaPredicted RBP10.97□□□□□ -0.65
LIG1-210ENST00000596332 HS3ST4Q9Y661 456 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 TECTAO75443 2155 aa10.97□□□□□ -0.65
LIG1-210ENST00000596332 IGLV3-10A0A075B6K4 115 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 A0A0A0MRY4 1105 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 DRGXA6NNA5 263 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 HOXC11O43248 304 aaPredicted RBP10.96□□□□□ -0.65
LIG1-210ENST00000596332 DCXO43602 365 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 F9P00740 461 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 CD72P21854 359 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 MIPP30301 263 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 CCR1P32246 355 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 GBP1P32455 592 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 RDXP35241 583 aaKnown RBP10.96□□□□□ -0.65
LIG1-210ENST00000596332 CYLC1P35663 651 aaPredicted RBP10.96□□□□□ -0.65
LIG1-210ENST00000596332 GGCXP38435 758 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 STARD6P59095 220 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 TAS2R40P59535 323 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 SCAPQ12770 1279 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 CDO1Q16878 200 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 ITPRIPL2Q3MIP1 535 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 BRMS1LQ5PSV4 323 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 NUGGCQ68CJ6 796 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 FBXL22Q6P050 247 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 DCUN1D2Q6PH85 259 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 TRIM67Q6ZTA4 783 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 UNC45BQ8IWX7 931 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 PYROXD2Q8N2H3 581 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 TTC16Q8NEE8 873 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 OR52K2Q8NGK3 314 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 ZNF564Q8TBZ8 553 aaPredicted RBP10.96□□□□□ -0.65
LIG1-210ENST00000596332 WFDC5Q8TCV5 224 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 NTAN1Q96AB6 310 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 BTN2A3PQ96KV6 586 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 C1orf74Q96LT6 269 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 WDCPQ9H6R7 721 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 MRPL47Q9HD33 250 aaKnown RBP10.96□□□□□ -0.65
LIG1-210ENST00000596332 UVRAGQ9P2Y5 699 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 FZD10Q9ULW2 581 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 ZNF510Q9Y2H8 683 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 SCINQ9Y6U3 715 aa10.96□□□□□ -0.65
LIG1-210ENST00000596332 TICRRQ7Z2Z1 1910 aa10.96□□□□□ -0.66
LIG1-210ENST00000596332 A0A0A6YYK5 440 aaPredicted RBP10.95□□□□□ -0.66
LIG1-210ENST00000596332 BTNL10A8MVZ5 291 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 SPECC1L-ADORA2AF8WAN1 911 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 SLC9A3R1O14745 358 aaPredicted RBP10.95□□□□□ -0.66
LIG1-210ENST00000596332 ARHGAP6O43182 974 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 TSPAN3O60637 253 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 PROSCO94903 275 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 MOCS2O96007 188 aaPredicted RBP10.95□□□□□ -0.66
LIG1-210ENST00000596332 TACR2P21452 398 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 PSMA2P25787 234 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 HOXD9P28356 352 aaPredicted RBP10.95□□□□□ -0.66
LIG1-210ENST00000596332 CTHP32929 405 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 IFNAR2P48551 515 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 HARS2P49590 506 aaKnown RBP10.95□□□□□ -0.66
LIG1-210ENST00000596332 GALK1P51570 392 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 ARSEP51690 589 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 VAV2P52735 878 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 RPS24P62847 133 aaKnown RBP10.95□□□□□ -0.66
LIG1-210ENST00000596332 NRG1Q02297 640 aaPredicted RBP10.95□□□□□ -0.66
LIG1-210ENST00000596332 SLC25A11Q02978 314 aaKnown RBP10.95□□□□□ -0.66
LIG1-210ENST00000596332 AUHQ13825 339 aaKnown RBP10.95□□□□□ -0.66
LIG1-210ENST00000596332 ATP13A4Q4VNC1 1196 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 RAP1GAP2Q684P5 730 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 TPGS1Q6ZTW0 290 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 KIAA0907Q7Z7F0 614 aaPredicted RBP10.95□□□□□ -0.66
LIG1-210ENST00000596332 YAF2Q8IY57 180 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 CTNNBL1Q8WYA6 563 aaPredicted RBP10.95□□□□□ -0.66
LIG1-210ENST00000596332 RFFLQ8WZ73 363 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 ATP2A3Q93084 1043 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 HAPLN3Q96S86 360 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 OSBPL2Q9H1P3 480 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 PLK2Q9NYY3 685 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 CTTNBP2NLQ9P2B4 639 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 ANAPC7Q9UJX3 599 aa10.95□□□□□ -0.66
LIG1-210ENST00000596332 LSM7Q9UK45 103 aaKnown RBP10.95□□□□□ -0.66
LIG1-210ENST00000596332 MYOFQ9NZM1 2061 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 TNFRSF10AO00220 468 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 PI15O43692 258 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 CACNG3O60359 315 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 CNTN5O94779 1100 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 NFATC1O95644 943 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 SLC2A3P11169 496 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 ADH5P11766 374 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 GLULP15104 373 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 IL4RP24394 825 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 PCK1P35558 622 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 CHKAP35790 457 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 SIGLEC14Q08ET2 396 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 PIGHQ14442 188 aaPredicted RBP10.94□□□□□ -0.66
LIG1-210ENST00000596332 ACAP1Q15027 740 aa10.94□□□□□ -0.66
LIG1-210ENST00000596332 MLF2Q15773 248 aaPredicted RBP10.94□□□□□ -0.66
LIG1-210ENST00000596332 ALFQ53S48 1182 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms