RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 FNIP1Q8TF40 1166 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 FAM3CQ92520 227 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 P2RY11Q96G91 374 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 BBS2Q9BXC9 721 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 TKTL2Q9H0I9 626 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 TBC1D17Q9HA65 648 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 ANLNQ9NQW6 1124 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 EPN1Q9Y6I3 576 aaPredicted RBP20.03■□□□□ 0.8
PNKP-207ENST00000596014 NEDD8-MDP1E9PL57 170 aa20.02■□□□□ 0.8
PNKP-207ENST00000596014 I6L893 689 aaPredicted RBP20.02■□□□□ 0.8
PNKP-207ENST00000596014 TMEM253P0C7T8 217 aa20.02■□□□□ 0.8
PNKP-207ENST00000596014 MTA1Q13330 715 aa20.02■□□□□ 0.8
PNKP-207ENST00000596014 RFWD3Q6PCD5 774 aa20.02■□□□□ 0.8
PNKP-207ENST00000596014 LRRC8AQ8IWT6 810 aa20.02■□□□□ 0.8
PNKP-207ENST00000596014 DDX50Q9BQ39 737 aaKnown RBP20.02■□□□□ 0.8
PNKP-207ENST00000596014 NUP85Q9BW27 656 aa20.02■□□□□ 0.8
PNKP-207ENST00000596014 MFSD1Q9H3U5 465 aa20.02■□□□□ 0.8
PNKP-207ENST00000596014 KANSL1LA0AUZ9 987 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 EIF3CLB5ME19 914 aaKnown RBP20.01■□□□□ 0.79
PNKP-207ENST00000596014 STK25O00506 426 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 TSPAN3O60637 253 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 PAGE1O75459 146 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 NDUFA10O95299 355 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 TYRP14679 529 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 PSMA2P25787 234 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 OPRD1P41143 372 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 MAGEA1P43355 309 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 ZNF252P-AS1Q0IIN9 211 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 PIK3R6Q5UE93 754 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 FYB2Q5VWT5 728 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 NAIF1Q69YI7 327 aaPredicted RBP20.01■□□□□ 0.79
PNKP-207ENST00000596014 RAD9BQ6WBX8 426 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 BHMTQ93088 406 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 EIF3CQ99613 913 aaKnown RBP20.01■□□□□ 0.79
PNKP-207ENST00000596014 C11orf16Q9NQ32 467 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 PLK2Q9NYY3 685 aa20.01■□□□□ 0.79
PNKP-207ENST00000596014 PENKP01210 267 aaPredicted RBP20■□□□□ 0.79
PNKP-207ENST00000596014 CYBBP04839 570 aa20■□□□□ 0.79
PNKP-207ENST00000596014 GALK1P51570 392 aa20■□□□□ 0.79
PNKP-207ENST00000596014 CCZ1BP86790 482 aa20■□□□□ 0.79
PNKP-207ENST00000596014 CCZ1P86791 482 aaPredicted RBP20■□□□□ 0.79
PNKP-207ENST00000596014 SPA17Q15506 151 aa20■□□□□ 0.79
PNKP-207ENST00000596014 MPPE1Q53F39 396 aa20■□□□□ 0.79
PNKP-207ENST00000596014 MS4A13Q5J8X5 152 aa20■□□□□ 0.79
PNKP-207ENST00000596014 RAP1GAP2Q684P5 730 aa20■□□□□ 0.79
PNKP-207ENST00000596014 BMP8AQ7Z5Y6 402 aa20■□□□□ 0.79
PNKP-207ENST00000596014 NAT16Q8N8M0 369 aa20■□□□□ 0.79
PNKP-207ENST00000596014 FLCNQ8NFG4 579 aa20■□□□□ 0.79
PNKP-207ENST00000596014 DDI1Q8WTU0 396 aa20■□□□□ 0.79
PNKP-207ENST00000596014 PBXIP1Q96AQ6 731 aa20■□□□□ 0.79
PNKP-207ENST00000596014 TMA16Q96EY4 203 aaKnown RBP20■□□□□ 0.79
PNKP-207ENST00000596014 NELL2Q99435 816 aa20■□□□□ 0.79
PNKP-207ENST00000596014 IRX2Q9BZI1 471 aaPredicted RBP20■□□□□ 0.79
PNKP-207ENST00000596014 FOXQ1Q9C009 403 aa20■□□□□ 0.79
PNKP-207ENST00000596014 FBRSL1Q9HCM7 1045 aaKnown RBP20■□□□□ 0.79
PNKP-207ENST00000596014 TMPRSS4Q9NRS4 437 aa20■□□□□ 0.79
PNKP-207ENST00000596014 INTUQ9ULD6 942 aa20■□□□□ 0.79
PNKP-207ENST00000596014 MRPS17Q9Y2R5 130 aaKnown RBP20■□□□□ 0.79
PNKP-207ENST00000596014 FAM86C2PA6NEL3 165 aa20■□□□□ 0.79
PNKP-207ENST00000596014 DESP17661 470 aa20■□□□□ 0.79
PNKP-207ENST00000596014 TACR2P21452 398 aa20■□□□□ 0.79
PNKP-207ENST00000596014 SLC6A11P48066 632 aa20■□□□□ 0.79
PNKP-207ENST00000596014 PON2Q15165 354 aa20■□□□□ 0.79
PNKP-207ENST00000596014 C12orf40Q86WS4 652 aa20■□□□□ 0.79
PNKP-207ENST00000596014 ETFBKMTQ8IXQ9 262 aa20■□□□□ 0.79
PNKP-207ENST00000596014 MYEOVQ96EZ4 313 aa20■□□□□ 0.79
PNKP-207ENST00000596014 PRMT1Q99873 361 aaKnown RBP20■□□□□ 0.79
PNKP-207ENST00000596014 P2RY13Q9BPV8 354 aa20■□□□□ 0.79
PNKP-207ENST00000596014 CTTNBP2NLQ9P2B4 639 aa20■□□□□ 0.79
PNKP-207ENST00000596014 UVRAGQ9P2Y5 699 aa20■□□□□ 0.79
PNKP-207ENST00000596014 ANAPC7Q9UJX3 599 aa20■□□□□ 0.79
PNKP-207ENST00000596014 MTF2Q9Y483 593 aaPredicted RBP20■□□□□ 0.79
PNKP-207ENST00000596014 PCDHA13Q9Y5I0 950 aa20■□□□□ 0.79
PNKP-207ENST00000596014 HS3ST4Q9Y661 456 aa20■□□□□ 0.79
PNKP-207ENST00000596014 CACNG3O60359 315 aa19.99■□□□□ 0.79
PNKP-207ENST00000596014 ADRA1BP35368 520 aa19.99■□□□□ 0.79
PNKP-207ENST00000596014 SGSHP51688 502 aa19.99■□□□□ 0.79
PNKP-207ENST00000596014 UBXN2BQ14CS0 331 aa19.99■□□□□ 0.79
PNKP-207ENST00000596014 CHSY1Q86X52 802 aa19.99■□□□□ 0.79
PNKP-207ENST00000596014 ZNF687Q8N1G0 1237 aa19.99■□□□□ 0.79
PNKP-207ENST00000596014 ZNF564Q8TBZ8 553 aaPredicted RBP19.99■□□□□ 0.79
PNKP-207ENST00000596014 CD101Q93033 1021 aa19.99■□□□□ 0.79
PNKP-207ENST00000596014 BTBD6Q96KE9 485 aa19.99■□□□□ 0.79
PNKP-207ENST00000596014 XPO6Q96QU8 1125 aaKnown RBP19.99■□□□□ 0.79
PNKP-207ENST00000596014 HAPLN3Q96S86 360 aa19.99■□□□□ 0.79
PNKP-207ENST00000596014 SIK2Q9H0K1 926 aa19.99■□□□□ 0.79
PNKP-207ENST00000596014 LTB4R2Q9NPC1 389 aa19.99■□□□□ 0.79
PNKP-207ENST00000596014 NDRG2Q9UN36 371 aaKnown RBP19.99■□□□□ 0.79
PNKP-207ENST00000596014 FAM170BA6NMN3 283 aa19.98■□□□□ 0.79
PNKP-207ENST00000596014 TULP3O75386 442 aa19.98■□□□□ 0.79
PNKP-207ENST00000596014 TARSP26639 723 aaKnown RBP19.98■□□□□ 0.79
PNKP-207ENST00000596014 EIF2DP41214 584 aaKnown RBP19.98■□□□□ 0.79
PNKP-207ENST00000596014 AUHQ13825 339 aaKnown RBP19.98■□□□□ 0.79
PNKP-207ENST00000596014 ARL13BQ3SXY8 428 aa19.98■□□□□ 0.79
PNKP-207ENST00000596014 TMEM196Q5HYL7 178 aa19.98■□□□□ 0.79
PNKP-207ENST00000596014 CWF19L1Q69YN2 538 aaKnown RBP19.98■□□□□ 0.79
PNKP-207ENST00000596014 SCYL2Q6P3W7 929 aa19.98■□□□□ 0.79
PNKP-207ENST00000596014 LGI2Q8N0V4 545 aa19.98■□□□□ 0.79
PNKP-207ENST00000596014 ARFGAP1Q8N6T3 406 aa19.98■□□□□ 0.79
PNKP-207ENST00000596014 EXOC4Q96A65 974 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms