RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 MCEEQ96PE7 176 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 XPO6Q96QU8 1125 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 SELENOOQ9BVL4 669 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 RRN3Q9NYV6 651 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 STIM2Q9P246 746 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 DEC1Q9P2X7 70 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 ADAMTS1Q9UHI8 967 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 SNX10Q9Y5X0 201 aa14.3□□□□□ -0.12
SHKBP1-207ENST00000595631 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 H0Y858 1186 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 TBL1XO60907 577 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 MFAP3LO75121 409 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 RTN2O75298 545 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 PAGE1O75459 146 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 CYBBP04839 570 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 CISD3P0C7P0 127 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 CHRM1P11229 460 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 KRT3P12035 628 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 GZMAP12544 262 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 PDGFRAP16234 1089 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 TACR2P21452 398 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 CCR1P32246 355 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 EIF4A3P38919 411 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 MAGEA9P43362 315 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 DGKGP49619 791 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 CXCR3P49682 368 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 RPS24P62847 133 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 OGDHQ02218 1023 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 PPP2R5DQ14738 602 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 CCDC14Q49A88 953 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 MPPE1Q53F39 396 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 C2orf27AQ580R0 203 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 MS4A13Q5J8X5 152 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 PPP1R15BQ5SWA1 713 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 BNIPLQ7Z465 357 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 CHSY1Q86X52 802 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 C1orf210Q8IVY1 113 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 LGI2Q8N0V4 545 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 ATP6V0D2Q8N8Y2 350 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 TERB1Q8NA31 727 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 RPLP0P6Q8NHW5 317 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 EXOC4Q96A65 974 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 TMA16Q96EY4 203 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 BTN2A3PQ96KV6 586 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 DNAJC7Q99615 494 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 ABHD10Q9NUJ1 306 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 HCN2Q9UL51 889 aa14.29□□□□□ -0.12
SHKBP1-207ENST00000595631 SIGLEC16A6NMB1 481 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 PRRT4C9JH25 899 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 ABCB4P21439 1286 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 GPD1P21695 349 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 SDC4P31431 198 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 HNRNPH3P31942 346 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 RDXP35241 583 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 TIE1P35590 1138 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 GRIA2P42262 883 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 IRAK1P51617 712 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 GEN1Q17RS7 908 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 C10orf76Q5T2E6 689 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 ARCQ7LC44 396 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 C14orf80Q86SX3 495 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 CIR1Q86X95 450 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 FAM131BQ86XD5 332 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 SYNPOQ8N3V7 929 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 CCDC33Q8N5R6 958 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 HJURPQ8NCD3 748 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 OR8K1Q8NGG5 319 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 USP33Q8TEY7 942 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 ZNF653Q96CK0 615 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 PGAP3Q96FM1 320 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 CHP1Q99653 195 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 PRMT1Q99873 361 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 TRIM7Q9C029 511 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 TKTL2Q9H0I9 626 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 ARHGEF38Q9NXL2 777 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 MYO1AQ9UBC5 1043 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 FBXO10Q9UK96 956 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 HS3ST4Q9Y661 456 aa14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 BZW2Q9Y6E2 419 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-207ENST00000595631 A0A0A0MRY4 1105 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 TBC1D3BA6NDS4 549 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 CCP110O43303 1012 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 LAMTOR5O43504 91 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 TPM1P09493 284 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 SLC2A3P11169 496 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 PTPN9P43378 593 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 KIR2DL1P43626 348 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 NUBP1P53384 320 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 GFPT1Q06210 699 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 MAMLD1Q13495 774 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 ARID5BQ14865 1188 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 FBXO43Q4G163 708 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 PLEKHA7Q6IQ23 1121 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 SND1Q7KZF4 910 aaKnown RBP eCLIP14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 SPEM1Q8N4L4 309 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 ALLCQ8N6M5 410 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 FAM172AQ8WUF8 416 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 VCPIP1Q96JH7 1222 aa14.27□□□□□ -0.13
SHKBP1-207ENST00000595631 DDX50Q9BQ39 737 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms