RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CHST9Q7L1S5 443 aa23.62■■□□□ 1.37
SSBP4-203ENST00000593641 AHI1Q8N157 1196 aa23.62■■□□□ 1.37
SSBP4-203ENST00000593641 KCTD13Q8WZ19 329 aa23.62■■□□□ 1.37
SSBP4-203ENST00000593641 SNX19Q92543 992 aa23.62■■□□□ 1.37
SSBP4-203ENST00000593641 GSDMAQ96QA5 445 aa23.62■■□□□ 1.37
SSBP4-203ENST00000593641 PCED1AQ9H1Q7 454 aa23.62■■□□□ 1.37
SSBP4-203ENST00000593641 LHX5Q9H2C1 402 aa23.62■■□□□ 1.37
SSBP4-203ENST00000593641 GAREM1Q9H706 876 aa23.62■■□□□ 1.37
SSBP4-203ENST00000593641 EIF2B4Q9UI10 523 aaKnown RBP23.62■■□□□ 1.37
SSBP4-203ENST00000593641 O00370 1275 aa23.61■■□□□ 1.37
SSBP4-203ENST00000593641 MSI1O43347 362 aaKnown RBP23.61■■□□□ 1.37
SSBP4-203ENST00000593641 LCP1P13796 627 aa23.61■■□□□ 1.37
SSBP4-203ENST00000593641 LRRC63Q05C16 580 aa23.61■■□□□ 1.37
SSBP4-203ENST00000593641 LRMPQ12912 555 aa23.61■■□□□ 1.37
SSBP4-203ENST00000593641 CAMK2GQ13555 558 aaPredicted RBP23.61■■□□□ 1.37
SSBP4-203ENST00000593641 ANKRD40Q6AI12 368 aa23.61■■□□□ 1.37
SSBP4-203ENST00000593641 ZC3H3Q8IXZ2 948 aaKnown RBP23.61■■□□□ 1.37
SSBP4-203ENST00000593641 SCML4Q8N228 414 aa23.61■■□□□ 1.37
SSBP4-203ENST00000593641 CYB5D2Q8WUJ1 264 aa23.61■■□□□ 1.37
SSBP4-203ENST00000593641 FBRSQ9HAH7 460 aa23.61■■□□□ 1.37
SSBP4-203ENST00000593641 ABCB8Q9NUT2 735 aa23.61■■□□□ 1.37
SSBP4-203ENST00000593641 GGA2Q9UJY4 613 aa23.61■■□□□ 1.37
SSBP4-203ENST00000593641 ACACAQ13085 2346 aa23.61■■□□□ 1.37
SSBP4-203ENST00000593641 FREM2Q5SZK8 3169 aa23.6■■□□□ 1.37
SSBP4-203ENST00000593641 GOLGA6L4A6NEF3 574 aa23.6■■□□□ 1.37
SSBP4-203ENST00000593641 SMC2O95347 1197 aa23.6■■□□□ 1.37
SSBP4-203ENST00000593641 ZNF883P0CG24 379 aa23.6■■□□□ 1.37
SSBP4-203ENST00000593641 PABPC1P11940 636 aaKnown RBP23.6■■□□□ 1.37
SSBP4-203ENST00000593641 DAOAP59103 153 aa23.6■■□□□ 1.37
SSBP4-203ENST00000593641 SETD7Q8WTS6 366 aaKnown RBP23.6■■□□□ 1.37
SSBP4-203ENST00000593641 ADAMTS14Q8WXS8 1223 aa23.6■■□□□ 1.37
SSBP4-203ENST00000593641 SLC35C1Q96A29 364 aa23.6■■□□□ 1.37
SSBP4-203ENST00000593641 GTPBP4Q9BZE4 634 aaKnown RBP23.6■■□□□ 1.37
SSBP4-203ENST00000593641 TMEM245Q9H330 911 aa23.6■■□□□ 1.37
SSBP4-203ENST00000593641 APOBEC2Q9Y235 224 aaKnown RBP23.6■■□□□ 1.37
SSBP4-203ENST00000593641 ATRXP46100 2492 aa23.6■■□□□ 1.37
SSBP4-203ENST00000593641 ATP5BP06576 529 aaKnown RBP23.59■■□□□ 1.37
SSBP4-203ENST00000593641 PAEPP09466 180 aa23.59■■□□□ 1.37
SSBP4-203ENST00000593641 SLC11A2P49281 568 aa23.59■■□□□ 1.37
SSBP4-203ENST00000593641 PMS1P54277 932 aaKnown RBP23.59■■□□□ 1.37
SSBP4-203ENST00000593641 NUGGCQ68CJ6 796 aa23.59■■□□□ 1.37
SSBP4-203ENST00000593641 TMEM270Q6UE05 265 aa23.59■■□□□ 1.37
SSBP4-203ENST00000593641 LCLAT1Q6UWP7 414 aa23.59■■□□□ 1.37
SSBP4-203ENST00000593641 FMR1NBQ8N0W7 255 aaPredicted RBP23.59■■□□□ 1.37
SSBP4-203ENST00000593641 ZNF366Q8N895 744 aa23.59■■□□□ 1.37
SSBP4-203ENST00000593641 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.59■■□□□ 1.37
SSBP4-203ENST00000593641 ZNF557Q8N988 423 aaPredicted RBP23.59■■□□□ 1.37
SSBP4-203ENST00000593641 GOLGA1Q92805 767 aa23.59■■□□□ 1.37
SSBP4-203ENST00000593641 SMARCE1Q969G3 411 aa23.59■■□□□ 1.37
SSBP4-203ENST00000593641 NT5C1BQ96P26 610 aa23.59■■□□□ 1.37
SSBP4-203ENST00000593641 IL21RQ9HBE5 538 aa23.59■■□□□ 1.37
SSBP4-203ENST00000593641 TM7SF3Q9NS93 570 aa23.59■■□□□ 1.37
SSBP4-203ENST00000593641 PCOLCE2Q9UKZ9 415 aa23.59■■□□□ 1.37
SSBP4-203ENST00000593641 TMEM131Q92545 1883 aa23.59■■□□□ 1.37
SSBP4-203ENST00000593641 GOLGA4Q13439 2230 aaKnown RBP23.59■■□□□ 1.37
SSBP4-203ENST00000593641 DSPP15924 2871 aaKnown RBP23.58■■□□□ 1.37
SSBP4-203ENST00000593641 TRIM49BA6NDI0 452 aa23.58■■□□□ 1.37
SSBP4-203ENST00000593641 DNTTP04053 509 aa23.58■■□□□ 1.37
SSBP4-203ENST00000593641 RGS7P49802 495 aa23.58■■□□□ 1.37
SSBP4-203ENST00000593641 AFF3P51826 1226 aaKnown RBP23.58■■□□□ 1.37
SSBP4-203ENST00000593641 STIM1Q13586 685 aa23.58■■□□□ 1.37
SSBP4-203ENST00000593641 HLA-BQ31612 363 aa23.58■■□□□ 1.37
SSBP4-203ENST00000593641 TTC31Q49AM3 519 aaPredicted RBP23.58■■□□□ 1.37
SSBP4-203ENST00000593641 PKDCCQ504Y2 493 aa23.58■■□□□ 1.37
SSBP4-203ENST00000593641 MBLAC2Q68D91 279 aa23.58■■□□□ 1.37
SSBP4-203ENST00000593641 MSANTD2Q6P1R3 559 aa23.58■■□□□ 1.37
SSBP4-203ENST00000593641 ADIPOR2Q86V24 386 aa23.58■■□□□ 1.37
SSBP4-203ENST00000593641 UNC45BQ8IWX7 931 aa23.58■■□□□ 1.37
SSBP4-203ENST00000593641 UBR7Q8N806 425 aa23.58■■□□□ 1.37
SSBP4-203ENST00000593641 IRGQQ8WZA9 623 aa23.58■■□□□ 1.37
SSBP4-203ENST00000593641 IRX2Q9BZI1 471 aaPredicted RBP23.58■■□□□ 1.37
SSBP4-203ENST00000593641 BTBD1Q9H0C5 482 aa23.58■■□□□ 1.37
SSBP4-203ENST00000593641 METTL14Q9HCE5 456 aaKnown RBP23.58■■□□□ 1.37
SSBP4-203ENST00000593641 FNDC3AQ9Y2H6 1198 aaKnown RBP23.58■■□□□ 1.37
SSBP4-203ENST00000593641 PCDHB4Q9Y5E5 795 aa23.58■■□□□ 1.37
SSBP4-203ENST00000593641 PTPRBP23467 1997 aa23.58■■□□□ 1.36
SSBP4-203ENST00000593641 PLXNB3Q9ULL4 1909 aa23.57■■□□□ 1.36
SSBP4-203ENST00000593641 M0QYV0 167 aa23.57■■□□□ 1.36
SSBP4-203ENST00000593641 CBFA2T3O75081 653 aa23.57■■□□□ 1.36
SSBP4-203ENST00000593641 DLDP09622 509 aaKnown RBP23.57■■□□□ 1.36
SSBP4-203ENST00000593641 POLR2EP19388 210 aaKnown RBP23.57■■□□□ 1.36
SSBP4-203ENST00000593641 ACSL1P33121 698 aa23.57■■□□□ 1.36
SSBP4-203ENST00000593641 FMO5P49326 533 aa23.57■■□□□ 1.36
SSBP4-203ENST00000593641 ZBTB16Q05516 673 aa23.57■■□□□ 1.36
SSBP4-203ENST00000593641 STILQ15468 1287 aa23.57■■□□□ 1.36
SSBP4-203ENST00000593641 TEAD4Q15561 434 aa23.57■■□□□ 1.36
SSBP4-203ENST00000593641 MPP7Q5T2T1 576 aa23.57■■□□□ 1.36
SSBP4-203ENST00000593641 GLRX5Q86SX6 157 aa23.57■■□□□ 1.36
SSBP4-203ENST00000593641 PNPLA1Q8N8W4 532 aa23.57■■□□□ 1.36
SSBP4-203ENST00000593641 C6orf106Q9H6K1 298 aaPredicted RBP23.57■■□□□ 1.36
SSBP4-203ENST00000593641 HOOK1Q9UJC3 728 aaKnown RBP23.57■■□□□ 1.36
SSBP4-203ENST00000593641 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.57■■□□□ 1.36
SSBP4-203ENST00000593641 A0A1B0GVT2 93 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 TYW5A2RUC4 315 aaKnown RBP23.56■■□□□ 1.36
SSBP4-203ENST00000593641 PIK3R2O00459 728 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 PSMA7O14818 248 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 IRAK2O43187 625 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 TBL1XO60907 577 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 SEMA4FO95754 770 aa23.56■■□□□ 1.36
SSBP4-203ENST00000593641 SGSHP51688 502 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms