RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SCNN1AP37088 669 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 GABRB2P47870 512 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 DEUP1Q05D60 604 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 MESP2Q0VG99 397 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 MTA1Q13330 715 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 SIM2Q14190 667 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-227ENST00000591849 CLEC16AQ2KHT3 1053 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 LRSAM1Q6UWE0 723 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 ANKS1BQ7Z6G8 1248 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 WDR5BQ86VZ2 330 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 XYLT1Q86Y38 959 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 SFTPA1Q8IWL2 248 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 FAM217AQ8IXS0 508 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 LGI2Q8N0V4 545 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 CARNMT1Q8N4J0 409 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 ZNF557Q8N988 423 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-227ENST00000591849 HJURPQ8NCD3 748 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-227ENST00000591849 CPLX3Q8WVH0 158 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 EZH1Q92800 747 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-227ENST00000591849 PIWIL1Q96J94 861 aaKnown RBP10.45□□□□□ -0.74
BRCA1-227ENST00000591849 SELENOOQ9BVL4 669 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 IRX2Q9BZI1 471 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-227ENST00000591849 EDEM3Q9BZQ6 932 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 CIPCQ9C0C6 399 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 WDCPQ9H6R7 721 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 ZDHHC4Q9NPG8 344 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 TMEM51Q9NW97 253 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 ADAM22Q9P0K1 906 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 IFNKQ9P0W0 207 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 NCDNQ9UBB6 729 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 STOML2Q9UJZ1 356 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 MMP17Q9ULZ9 603 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 CEP250Q9BV73 2442 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 FRYLO94915 3013 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 LRRC53A6NM62 1247 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 KCNU1A8MYU2 1149 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 H0Y626 953 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 MOCS3O95396 460 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 CYP1A1P04798 512 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-227ENST00000591849 TACR2P21452 398 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 NTSR1P30989 418 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 HOXA6P31267 233 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 KIR2DL1P43626 348 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-227ENST00000591849 PITX1P78337 314 aaPredicted RBP10.44□□□□□ -0.74
BRCA1-227ENST00000591849 DMWDQ09019 674 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 KLHL30Q0D2K2 578 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 CDH18Q13634 790 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 USP39Q53GS9 565 aaKnown RBP10.44□□□□□ -0.74
BRCA1-227ENST00000591849 MS4A13Q5J8X5 152 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 RABGAP1LQ5R372 815 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 PIK3R6Q5UE93 754 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 EGFLAMQ63HQ2 1017 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 RAP1GAP2Q684P5 730 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 ANO7Q6IWH7 933 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 PPP1R2P3Q6NXS1 205 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 ASCL5Q7RTU5 278 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 MFN1Q8IWA4 741 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 PHTF2Q8N3S3 785 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 IL17RCQ8NAC3 791 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 ZBTB44Q8NCP5 570 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 RNF214Q8ND24 703 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 WFIKKN2Q8TEU8 576 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 IQCDQ96DY2 449 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 SLC39A13Q96H72 371 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 PCDHB18PQ96TA0 734 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 SIK2Q9H0K1 926 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 NUCKS1Q9H1E3 243 aaKnown RBP10.44□□□□□ -0.74
BRCA1-227ENST00000591849 METTL5Q9NRN9 209 aaKnown RBP10.44□□□□□ -0.74
BRCA1-227ENST00000591849 ABCB8Q9NUT2 735 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 FBXO10Q9UK96 956 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 PLA2G4CQ9UP65 541 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 SLC27A6Q9Y2P4 619 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.44□□□□□ -0.744e-6■■□□□ 13.9
BRCA1-227ENST00000591849 MYO16Q9Y6X6 1858 aa10.44□□□□□ -0.74
BRCA1-227ENST00000591849 TCRBV21S2A2A0A5A6 115 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 TMCO5BA8MYB1 307 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 PRRT4C9JH25 899 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 SGK1O00141 431 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 MAP3K13O43283 966 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 SYNCRIPO60506 623 aaKnown RBP10.43□□□□□ -0.74
BRCA1-227ENST00000591849 RPP40O75818 363 aaKnown RBP10.43□□□□□ -0.74
BRCA1-227ENST00000591849 ATP5BP06576 529 aaKnown RBP10.43□□□□□ -0.74
BRCA1-227ENST00000591849 TPM1P09493 284 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 PABPC1P11940 636 aaKnown RBP10.43□□□□□ -0.74
BRCA1-227ENST00000591849 KRT3P12035 628 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 HOXB2P14652 356 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 PDGFRAP16234 1089 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 POLR2EP19388 210 aaKnown RBP10.43□□□□□ -0.74
BRCA1-227ENST00000591849 MMP8P22894 467 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 HOXD9P28356 352 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-227ENST00000591849 SDC4P31431 198 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 SLC6A4P31645 630 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 RPS24P62847 133 aaKnown RBP10.43□□□□□ -0.74
BRCA1-227ENST00000591849 ATP11AP98196 1134 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 BYSLQ13895 437 aaKnown RBP10.43□□□□□ -0.74
BRCA1-227ENST00000591849 STARD3Q14849 445 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 CRY1Q16526 586 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 LPAL2Q16609 132 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 GEN1Q17RS7 908 aa10.43□□□□□ -0.74
BRCA1-227ENST00000591849 SLC25A52Q3SY17 297 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms