RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 RHOT1Q8IXI2 618 aa12.6□□□□□ -0.39
DNMT1-218ENST00000589294 CCDC185Q8N715 623 aa12.6□□□□□ -0.39
DNMT1-218ENST00000589294 RSAD2Q8WXG1 361 aa12.6□□□□□ -0.39
DNMT1-218ENST00000589294 ATP2A3Q93084 1043 aa12.6□□□□□ -0.39
DNMT1-218ENST00000589294 PRMT1Q99873 361 aaKnown RBP12.6□□□□□ -0.39
DNMT1-218ENST00000589294 RETREG1Q9H6L5 497 aa12.6□□□□□ -0.39
DNMT1-218ENST00000589294 ANLNQ9NQW6 1124 aa12.6□□□□□ -0.39
DNMT1-218ENST00000589294 TRMT1Q9NXH9 659 aaKnown RBP12.6□□□□□ -0.39
DNMT1-218ENST00000589294 OR12D3Q9UGF7 316 aa12.6□□□□□ -0.39
DNMT1-218ENST00000589294 HS3ST4Q9Y661 456 aa12.6□□□□□ -0.39
DNMT1-218ENST00000589294 UNC80Q8N2C7 3258 aa12.6□□□□□ -0.39
DNMT1-218ENST00000589294 I6L893 689 aaPredicted RBP12.59□□□□□ -0.39
DNMT1-218ENST00000589294 GFRA2O00451 464 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 SPOPO43791 374 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 NFATC1O95644 943 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 RARAP10276 462 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 IL1R2P27930 398 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 L1CAMP32004 1257 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 HTR7P34969 479 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 AUHQ13825 339 aaKnown RBP12.59□□□□□ -0.39
DNMT1-218ENST00000589294 EML3Q32P44 896 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 C5orf22Q49AR2 442 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 TJAP1Q5JTD0 557 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 MPP7Q5T2T1 576 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 PIK3R6Q5UE93 754 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 NADSYN1Q6IA69 706 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 RHBDF2Q6PJF5 856 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 CYP4V2Q6ZWL3 525 aaPredicted RBP12.59□□□□□ -0.39
DNMT1-218ENST00000589294 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.59□□□□□ -0.39
DNMT1-218ENST00000589294 ST13P5Q8NFI4 369 aaPredicted RBP12.59□□□□□ -0.39
DNMT1-218ENST00000589294 TRIM58Q8NG06 486 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 TMA16Q96EY4 203 aaKnown RBP12.59□□□□□ -0.39
DNMT1-218ENST00000589294 ALS2CR12Q96Q35 445 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 PEBP4Q96S96 227 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 SIK2Q9H0K1 926 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 BRD9Q9H8M2 597 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 SPHK2Q9NRA0 654 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 XPO7Q9UIA9 1087 aaKnown RBP12.59□□□□□ -0.39
DNMT1-218ENST00000589294 AMFRQ9UKV5 643 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.59□□□□□ -0.39
DNMT1-218ENST00000589294 WNT6Q9Y6F9 365 aa12.59□□□□□ -0.39
DNMT1-218ENST00000589294 GOLGA6L7A0A1B0GV03 622 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 DRGXA6NNA5 263 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 MIF4GDA9UHW6 222 aaKnown RBP12.58□□□□□ -0.4
DNMT1-218ENST00000589294 F5H5T6 163 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 ARNTLO00327 626 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 PSTPIP1O43586 416 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 KIF5CO60282 957 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 ADH1CP00326 375 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 CYBBP04839 570 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 TCF4P15884 667 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 TACR2P21452 398 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 MSNP26038 577 aaKnown RBP12.58□□□□□ -0.4
DNMT1-218ENST00000589294 HCAR3P49019 387 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 TAS2R40P59535 323 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 PFKPQ01813 784 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 RUNX3Q13761 415 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 GRM2Q14416 872 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 PDK2Q15119 407 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 DPYSL2Q16555 572 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 MPPE1Q53F39 396 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 RABGAP1LQ5R372 815 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 DAB2IPQ5VWQ8 1189 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 RAP1GAP2Q684P5 730 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 FBXL22Q6P050 247 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 PEX26Q7Z412 305 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 NT5DC3Q86UY8 548 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 TMEM25Q86YD3 366 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 MAP7D3Q8IWC1 876 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 GJD3Q8N144 294 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 CD101Q93033 1021 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 SNRNP25Q9BV90 132 aaKnown RBP12.58□□□□□ -0.4
DNMT1-218ENST00000589294 DHX35Q9H5Z1 703 aaKnown RBP12.58□□□□□ -0.4
DNMT1-218ENST00000589294 ECT2Q9H8V3 914 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 ZWILCHQ9H900 591 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 SLC2A4RGQ9NR83 387 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 DDX56Q9NY93 547 aaKnown RBP12.58□□□□□ -0.4
DNMT1-218ENST00000589294 MARK1Q9P0L2 795 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 PPARGC1AQ9UBK2 798 aaKnown RBP12.58□□□□□ -0.4
DNMT1-218ENST00000589294 AP4E1Q9UPM8 1137 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 ZKSCAN5Q9Y2L8 839 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 PCDHA3Q9Y5H8 950 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 CAPN6Q9Y6Q1 641 aa12.58□□□□□ -0.4
DNMT1-218ENST00000589294 HELZP42694 1942 aaKnown RBP12.58□□□□□ -0.4
DNMT1-218ENST00000589294 IGLV3-10A0A075B6K4 115 aa12.57□□□□□ -0.4
DNMT1-218ENST00000589294 CCDC66A2RUB6 948 aa12.57□□□□□ -0.4
DNMT1-218ENST00000589294 SCAMP3O14828 347 aaKnown RBP12.57□□□□□ -0.4
DNMT1-218ENST00000589294 ASGR2P07307 311 aa12.57□□□□□ -0.4
DNMT1-218ENST00000589294 SRFP11831 508 aa12.57□□□□□ -0.4
DNMT1-218ENST00000589294 GLULP15104 373 aa12.57□□□□□ -0.4
DNMT1-218ENST00000589294 SLC6A4P31645 630 aa12.57□□□□□ -0.4
DNMT1-218ENST00000589294 AMPD2Q01433 879 aa12.57□□□□□ -0.4
DNMT1-218ENST00000589294 GAD2Q05329 585 aa12.57□□□□□ -0.4
DNMT1-218ENST00000589294 SEMA3BQ13214 749 aa12.57□□□□□ -0.4
DNMT1-218ENST00000589294 DHCR24Q15392 516 aa12.57□□□□□ -0.4
DNMT1-218ENST00000589294 ITPRIPL2Q3MIP1 535 aa12.57□□□□□ -0.4
DNMT1-218ENST00000589294 KCNT1Q5JUK3 1230 aa12.57□□□□□ -0.4
DNMT1-218ENST00000589294 LY6G5CQ5SRR4 150 aa12.57□□□□□ -0.4
DNMT1-218ENST00000589294 TTC39BQ5VTQ0 682 aaPredicted RBP12.57□□□□□ -0.4
DNMT1-218ENST00000589294 TRIM68Q6AZZ1 485 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms