RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 FAM155BO75949 473 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 SNAI1O95863 264 aaPredicted RBP7.64□□□□□ -1.19
ZNF540-206ENST00000589117 FAM163BP0C2L3 166 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 GNAT1P11488 350 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 TPSB2P20231 275 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 CYP3A5P20815 502 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 IL4RP24394 825 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 ADRA1DP25100 572 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 TAF6P49848 677 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 KCNJ2P63252 427 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 GAD2Q05329 585 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 TPSAB1Q15661 275 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 MARCH8Q5T0T0 291 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 CGB2Q6NT52 195 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 CYP4V2Q6ZWL3 525 aaPredicted RBP7.64□□□□□ -1.19
ZNF540-206ENST00000589117 CYS1Q717R9 158 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 PPM1NQ8N819 430 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 TFB1MQ8WVM0 346 aaKnown RBP7.64□□□□□ -1.19
ZNF540-206ENST00000589117 CENPIQ92674 756 aaPredicted RBP7.64□□□□□ -1.19
ZNF540-206ENST00000589117 TBC1D31Q96DN5 1066 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 RSRC1Q96IZ7 334 aaKnown RBP7.64□□□□□ -1.19
ZNF540-206ENST00000589117 FAM49AQ9H0Q0 323 aaPredicted RBP7.64□□□□□ -1.19
ZNF540-206ENST00000589117 LRMDAQ9H2I8 198 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 ADAMTS10Q9H324 1103 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 NPHS2Q9NP85 383 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 SETD4Q9NVD3 440 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 RPL26L1Q9UNX3 145 aaKnown RBP7.64□□□□□ -1.19
ZNF540-206ENST00000589117 AP4E1Q9UPM8 1137 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 TMA7Q9Y2S6 64 aaKnown RBP7.64□□□□□ -1.19
ZNF540-206ENST00000589117 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.64□□□□□ -1.19
ZNF540-206ENST00000589117 MAD1L1Q9Y6D9 718 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 CCL15-CCL14A0A0B4J2E2 113 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 WDR91A4D1P6 747 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 CDK2AP1O14519 115 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 KLF11O14901 512 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 HGSO14964 777 aaPredicted RBP7.64□□□□□ -1.19
ZNF540-206ENST00000589117 WFS1O76024 890 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 IL1BP01584 269 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 APOEP02649 317 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 KRT16P08779 473 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 CYP2C9P11712 490 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 MLNP12872 115 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 DARSP14868 501 aaKnown RBP7.64□□□□□ -1.19
ZNF540-206ENST00000589117 SMPD1P17405 629 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 PRKCHP24723 683 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 HOXA11P31270 313 aaPredicted RBP7.64□□□□□ -1.19
ZNF540-206ENST00000589117 L1CAMP32004 1257 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 MATKP42679 507 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 ARFIP2P53365 341 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 HDAC4P56524 1084 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 MGAT5Q09328 741 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 FAAP100Q0VG06 881 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 EFTUD2Q15029 972 aaKnown RBP eCLIP7.64□□□□□ -1.19
ZNF540-206ENST00000589117 CCL15Q16663 113 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 SOWAHAQ2M3V2 549 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 C11orf91Q3C1V1 193 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 NLRP9Q7RTR0 991 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 GPR142Q7Z601 462 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 PLEKHH3Q7Z736 793 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 ANKRD23Q86SG2 305 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 PQLC3Q8N755 202 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 GSDMBQ8TAX9 411 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 RAB3IL1Q8TBN0 382 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 MZB1Q8WU39 189 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 MAML3Q96JK9 1138 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 ANKRD27Q96NW4 1050 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 PARK7Q99497 189 aaKnown RBP7.64□□□□□ -1.19
ZNF540-206ENST00000589117 YY1AP1Q9H869 796 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 STAP1Q9ULZ2 295 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 CHKBQ9Y259 395 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 EVPLQ92817 2033 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 OTOFQ9HC10 1997 aa7.64□□□□□ -1.19
ZNF540-206ENST00000589117 TRIM49D1C9J1S8 452 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 PIRO00625 290 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 CCDC22O60826 627 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 RECQL4O94761 1208 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 LMNAP02545 664 aaKnown RBP7.63□□□□□ -1.19
ZNF540-206ENST00000589117 ATP5BP06576 529 aaKnown RBP7.63□□□□□ -1.19
ZNF540-206ENST00000589117 PDGFRBP09619 1106 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 LCP1P13796 627 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 ADORA2BP29275 332 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 YWHAZP63104 245 aaKnown RBP7.63□□□□□ -1.19
ZNF540-206ENST00000589117 GRB14Q14449 540 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 SLC25A52Q3SY17 297 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 EGFLAMQ63HQ2 1017 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 SDE2Q6IQ49 451 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 TRNP1Q6NT89 227 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 ALKAL1Q6UXT8 129 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 ARHGAP24Q8N264 748 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 NME8Q8N427 588 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 FBXO41Q8TF61 875 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 C10orf82Q8WW14 230 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 TTC17Q96AE7 1141 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 FAM111AQ96PZ2 611 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 EBNA1BP2Q99848 306 aaKnown RBP7.63□□□□□ -1.19
ZNF540-206ENST00000589117 GPATCH2LQ9NWQ4 482 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 GTF2IRD1Q9UHL9 959 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 GRID1Q9ULK0 1009 aa7.63□□□□□ -1.19
ZNF540-206ENST00000589117 PIN4Q9Y237 131 aaKnown RBP7.63□□□□□ -1.19
ZNF540-206ENST00000589117 ANK1P16157 1881 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms