RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 GCC1Q96CN9 775 aa3.97□□□□□ -1.77
SMAD4-207ENST00000589076 R3HDM4Q96D70 268 aa3.97□□□□□ -1.77
SMAD4-207ENST00000589076 VPS50Q96JG6 964 aa3.97□□□□□ -1.77
SMAD4-207ENST00000589076 LYZL4Q96KX0 146 aa3.97□□□□□ -1.77
SMAD4-207ENST00000589076 RTKNQ9BST9 563 aa3.97□□□□□ -1.77
SMAD4-207ENST00000589076 DDX23Q9BUQ8 820 aaKnown RBP3.97□□□□□ -1.77
SMAD4-207ENST00000589076 PABPC3Q9H361 631 aaKnown RBP3.97□□□□□ -1.77
SMAD4-207ENST00000589076 SAYSD1Q9NPB0 183 aa3.97□□□□□ -1.77
SMAD4-207ENST00000589076 MTMR4Q9NYA4 1195 aa3.97□□□□□ -1.77
SMAD4-207ENST00000589076 KIF17Q9P2E2 1029 aa3.97□□□□□ -1.77
SMAD4-207ENST00000589076 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.97□□□□□ -1.77
SMAD4-207ENST00000589076 NFU1Q9UMS0 254 aa3.97□□□□□ -1.77
SMAD4-207ENST00000589076 GABRQQ9UN88 632 aa3.97□□□□□ -1.77
SMAD4-207ENST00000589076 FAM90A8PA6NJQ4 464 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 EFCAB8A8MWE9 144 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 EXOC3O60645 756 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 CBFA2T3O75081 653 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 TAF5LO75529 589 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 FAM155BO75949 473 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 WDR47O94967 919 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 TJP3O95049 919 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 FAM90A13PP0C7W8 464 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 FAM90A24PP0C7X0 464 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 GYS1P13807 737 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 CREB1P16220 341 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 ATP5F1P24539 256 aaPredicted RBP3.96□□□□□ -1.78
SMAD4-207ENST00000589076 CST5P28325 142 aaPredicted RBP3.96□□□□□ -1.78
SMAD4-207ENST00000589076 EIF4A1P60842 406 aaKnown RBP3.96□□□□□ -1.78
SMAD4-207ENST00000589076 SUMO2P61956 95 aaKnown RBP3.96□□□□□ -1.78
SMAD4-207ENST00000589076 KCNJ12Q14500 433 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 SEMA3AQ14563 771 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 RBMS2Q15434 407 aaKnown RBP3.96□□□□□ -1.78
SMAD4-207ENST00000589076 TIGD6Q17RP2 521 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 DENND2CQ68D51 928 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 NFRKBQ6P4R8 1299 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 IRF2BP2Q7Z5L9 587 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 SIRT6Q8N6T7 355 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 SDCCAG3Q96C92 435 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 RITA1Q96K30 269 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 PAAF1Q9BRP4 392 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 MLXIPQ9HAP2 919 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 PRDM8Q9NQV8 689 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 ITM2CQ9NQX7 267 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 POT1Q9NUX5 634 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 KLHL13Q9P2N7 655 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 MGAT4CQ9UBM8 478 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 LPAR3Q9UBY5 353 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 SRP68Q9UHB9 627 aaKnown RBP3.96□□□□□ -1.78
SMAD4-207ENST00000589076 GTF2A1LQ9UNN4 478 aa3.96□□□□□ -1.78
SMAD4-207ENST00000589076 RNF8O76064 485 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 MYCLP12524 364 aaPredicted RBP3.95□□□□□ -1.78
SMAD4-207ENST00000589076 MMP8P22894 467 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 YY1P25490 414 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 KLRK1P26718 216 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 PBX1P40424 430 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 GSTM5P46439 218 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 CDK7P50613 346 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 PNLIPRP1P54315 467 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 SEMA3BQ13214 749 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 EFR3AQ14156 821 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 TAF5Q15542 800 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 ADCK5Q3MIX3 580 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 TMEM196Q5HYL7 178 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 ANKRD45Q5TZF3 282 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 LIN54Q6MZP7 749 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 LVRNQ6Q4G3 990 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 ZNF813Q6ZN06 617 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 PTCHD4Q6ZW05 846 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 Q6ZWC4 215 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 MEPCEQ7L2J0 689 aaKnown RBP3.95□□□□□ -1.78
SMAD4-207ENST00000589076 RAB11FIP2Q7L804 512 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 TRABD2AQ86V40 505 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 MOGAT3Q86VF5 341 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 CLASRPQ8N2M8 674 aaKnown RBP3.95□□□□□ -1.78
SMAD4-207ENST00000589076 TERB1Q8NA31 727 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 OR1N1Q8NGS0 311 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 OR6Y1Q8NGX8 325 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 SCAMP5Q8TAC9 235 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 SPPL3Q8TCT6 385 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 COQ8BQ96D53 544 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 THOC3Q96J01 351 aaKnown RBP3.95□□□□□ -1.78
SMAD4-207ENST00000589076 ZSCAN31Q96LW9 406 aaPredicted RBP3.95□□□□□ -1.78
SMAD4-207ENST00000589076 FYTTD1Q96QD9 318 aaKnown RBP3.95□□□□□ -1.78
SMAD4-207ENST00000589076 SNX18Q96RF0 628 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 PRR25Q96S07 402 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 EIF3CQ99613 913 aaKnown RBP3.95□□□□□ -1.78
SMAD4-207ENST00000589076 SEPSECSQ9HD40 501 aaKnown RBP3.95□□□□□ -1.78
SMAD4-207ENST00000589076 FSCN3Q9NQT6 498 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 AMFRQ9UKV5 643 aa3.95□□□□□ -1.78
SMAD4-207ENST00000589076 C19orf53Q9UNZ5 99 aaPredicted RBP3.95□□□□□ -1.78
SMAD4-207ENST00000589076 FAM90A18PA6NE21 464 aa3.94□□□□□ -1.78
SMAD4-207ENST00000589076 FAM90A16PA6NEW6 464 aa3.94□□□□□ -1.78
SMAD4-207ENST00000589076 HMX3A6NHT5 357 aa3.94□□□□□ -1.78
SMAD4-207ENST00000589076 CD8B2A6NJW9 211 aa3.94□□□□□ -1.78
SMAD4-207ENST00000589076 FAM90A9PA6NNJ1 464 aa3.94□□□□□ -1.78
SMAD4-207ENST00000589076 FAM90A5PA8MXJ8 464 aa3.94□□□□□ -1.78
SMAD4-207ENST00000589076 TMEM232C9JQI7 657 aa3.94□□□□□ -1.78
SMAD4-207ENST00000589076 H3BNX3 289 aa3.94□□□□□ -1.78
SMAD4-207ENST00000589076 AP4M1O00189 453 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms