RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 FREM2Q5SZK8 3169 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 PLXNB3Q9ULL4 1909 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 KRT37O76014 449 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 GNA14O95837 355 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 EPHX1P07099 455 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 HLA-EP13747 358 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 TPMTP51580 245 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 ATXN3P54252 364 aaPredicted RBP19.55■□□□□ 0.72
TRIM47-205ENST00000587774 FOXC1Q12948 553 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 E2F5Q15329 346 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 FAM133BQ5BKY9 247 aaKnown RBP19.55■□□□□ 0.72
TRIM47-205ENST00000587774 RFWD3Q6PCD5 774 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 MINDY1Q8N5J2 469 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 OR2I1PQ8NGU4 316 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 WFDC5Q8TCV5 224 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 CYB5D2Q8WUJ1 264 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 TMA16Q96EY4 203 aaKnown RBP19.55■□□□□ 0.72
TRIM47-205ENST00000587774 SIPA1Q96FS4 1042 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 HSFY1Q96LI6 401 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 SRRTQ9BXP5 876 aaKnown RBP19.55■□□□□ 0.72
TRIM47-205ENST00000587774 ABCB8Q9NUT2 735 aa19.55■□□□□ 0.72
TRIM47-205ENST00000587774 WSB2Q9NYS7 404 aaPredicted RBP19.55■□□□□ 0.72
TRIM47-205ENST00000587774 DMXL2Q8TDJ6 3036 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 FBXO21O94952 628 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 FYNP06241 537 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 KRT5P13647 590 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 MAOBP27338 520 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 SLC6A4P31645 630 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 SEMA3BQ13214 749 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 SYCP2LQ5T4T6 812 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 NUGGCQ68CJ6 796 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 CHST9Q7L1S5 443 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 ADIPOR2Q86V24 386 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 AHI1Q8N157 1196 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.54■□□□□ 0.72
TRIM47-205ENST00000587774 WFIKKN2Q8TEU8 576 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 PRCCQ92733 491 aaPredicted RBP19.54■□□□□ 0.72
TRIM47-205ENST00000587774 GOLGA1Q92805 767 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 FOXJ1Q92949 421 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 GPR174Q9BXC1 333 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 ITM2CQ9NQX7 267 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 GGA2Q9UJY4 613 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 CNTN6Q9UQ52 1028 aa19.54■□□□□ 0.72
TRIM47-205ENST00000587774 GOLGA6L7A0A1B0GV03 622 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 MEI4A8MW99 385 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 ARHGAP33O14559 1287 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 TIMM44O43615 452 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 IGLV3-19P01714 112 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 PABPC1P11940 636 aaKnown RBP19.53■□□□□ 0.72
TRIM47-205ENST00000587774 TBX4P57082 545 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 RING1Q06587 406 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 PLEKHG6Q3KR16 790 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 FNDC3BQ53EP0 1204 aaKnown RBP19.53■□□□□ 0.72
TRIM47-205ENST00000587774 PIK3R6Q5UE93 754 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 NADSYN1Q6IA69 706 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 KIAA0907Q7Z7F0 614 aaPredicted RBP19.53■□□□□ 0.72
TRIM47-205ENST00000587774 UNC45BQ8IWX7 931 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 ZNF366Q8N895 744 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 DQX1Q8TE96 717 aaKnown RBP19.53■□□□□ 0.72
TRIM47-205ENST00000587774 PRICKLE1Q96MT3 831 aaPredicted RBP19.53■□□□□ 0.72
TRIM47-205ENST00000587774 TMEM245Q9H330 911 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 ST7Q9NRC1 585 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 WASF3Q9UPY6 502 aa19.53■□□□□ 0.72
TRIM47-205ENST00000587774 ACSL4O60488 711 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 TBL1XO60907 577 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 SYPP08247 313 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 CD70P32970 193 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 GPD2P43304 727 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 RPL34P49207 117 aaKnown RBP19.52■□□□□ 0.72
TRIM47-205ENST00000587774 SLC11A2P49281 568 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 CAMK2GQ13555 558 aaPredicted RBP19.52■□□□□ 0.72
TRIM47-205ENST00000587774 PTPRNQ16849 979 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 WDR45BQ5MNZ6 344 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 DENND1BQ6P3S1 775 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 PIP4P1Q86T03 277 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 SCUBE3Q8IX30 993 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 HDDC3Q8N4P3 179 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 OR2T3Q8NH03 318 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 FCRL2Q96LA5 508 aaPredicted RBP19.52■□□□□ 0.72
TRIM47-205ENST00000587774 SLC32A1Q9H598 525 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 UBE2TQ9NPD8 197 aaPredicted RBP19.52■□□□□ 0.72
TRIM47-205ENST00000587774 SUSD2Q9UGT4 822 aa19.52■□□□□ 0.72
TRIM47-205ENST00000587774 UPK3BL1B0FP48 263 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 UPK3BL2E5RIL1 263 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 IRAK2O43187 625 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 OPHN1O60890 802 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 TOP3BO95985 862 aaKnown RBP19.51■□□□□ 0.71
TRIM47-205ENST00000587774 ACADMP11310 421 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 GNSP15586 552 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 SPINK2P20155 84 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 MPP7Q5T2T1 576 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 MBLAC2Q68D91 279 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 ZCCHC9Q8N567 271 aaKnown RBP19.51■□□□□ 0.71
TRIM47-205ENST00000587774 CADM4Q8NFZ8 388 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 ADAM32Q8TC27 787 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 DNASE2BQ8WZ79 361 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 FAM149B1Q96BN6 582 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 MYEOVQ96EZ4 313 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 SERPINB11Q96P15 392 aa19.51■□□□□ 0.71
TRIM47-205ENST00000587774 ACP6Q9NPH0 428 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms