RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 WDR27A2RRH5 827 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 MYO1GB0I1T2 1018 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 ATP5BP06576 529 aaKnown RBP9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 APOA4P06727 396 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 PDHA1P08559 390 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 CSH1P0DML2 217 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 CSH2P0DML3 217 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 POLR2EP19388 210 aaKnown RBP9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 RAD23BP54727 409 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 NCKAP1LP55160 1127 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 SMAD3P84022 425 aaKnown RBP9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 ACOX1Q15067 660 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 PCBP1Q15365 356 aaKnown RBP eCLIP9.97□□□□□ -0.813e-12■■■■■ 34.2
GPATCH8-205ENST00000587228 TARBP2Q15633 366 aaKnown RBP9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 ZNF470Q6ECI4 717 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 DCLRE1AQ6PJP8 1040 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 DOK6Q6PKX4 331 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 OTOAQ7RTW8 1153 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 PRPF39Q86UA1 669 aaKnown RBP9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 ANKRD52Q8NB46 1076 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 ZNF384Q8TF68 577 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 SHC3Q92529 594 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 UROC1Q96N76 676 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 FGFBP2Q9BYJ0 223 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 FAM129AQ9BZQ8 928 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 SIGLEC16A6NMB1 481 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 EVPLLA8MZ36 301 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 SEC24DO94855 1032 aaPredicted RBP9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 ZSCAN5DPP0CG00 497 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 KDELR1P24390 212 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 RPL9P32969 192 aaKnown RBP9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 HALP42357 657 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 MMP13P45452 471 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 RTP1P59025 263 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 PRKCZQ05513 592 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 GRIK3Q13003 919 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 TUSC3Q13454 348 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 MIIPQ5JXC2 388 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 FAM71AQ8IYT1 594 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 PHF21BQ96EK2 531 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 SEC16BQ96JE7 1060 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 ACTR8Q9H981 624 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 SPG21Q9NZD8 308 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 TUBGCP4Q9UGJ1 667 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 SUFUQ9UMX1 484 aa9.97□□□□□ -0.81
GPATCH8-205ENST00000587228 NFAT5O94916 1531 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 FAM237AA0A1B0GTK4 181 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 AGRPO00253 132 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 AKAP10O43572 662 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 KLHL2O95198 593 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 SMPD1P17405 629 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 CDC16Q13042 620 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 DUSP4Q13115 394 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 MAMLD1Q13495 774 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 FBXL19Q6PCT2 694 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 KIF2BQ8N4N8 673 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 BSNDQ8WZ55 320 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 THUMPD3Q9BV44 507 aaKnown RBP9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 C2orf49Q9BVC5 232 aaPredicted RBP9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 SLC28A3Q9HAS3 691 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 SEPT3Q9UH03 358 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 DCDC2Q9UHG0 476 aa9.96□□□□□ -0.81
GPATCH8-205ENST00000587228 SMIM28A0A1B0GU29 152 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 APOC4-APOC2K7ER74 178 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 LYPLA2O95372 231 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 APOC2P02655 101 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 OR4Q2P0C623 313 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 MSH3P20585 1137 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 IRAK1P51617 712 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 RPL7AP62424 266 aaKnown RBP9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 EFL1Q7Z2Z2 1120 aaKnown RBP9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 GLT6D1Q7Z4J2 308 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 NETO2Q8NC67 525 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 LRRN4Q8WUT4 740 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 TNFRSF25Q93038 417 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 LENG9Q96B70 501 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 CMTM5Q96DZ9 223 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 SELENONQ9NZV5 590 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 FAM153AQ9UHL3 310 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 DNMT3LQ9UJW3 386 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 MTO1Q9Y2Z2 717 aaKnown RBP9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 TRAV19A0A0A6YYK7 116 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 A0A0B4J269 797 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 IFRD1O00458 451 aaPredicted RBP9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 ARIH2O95376 493 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 EEF1DP29692 281 aaKnown RBP9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 CD151P48509 253 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 POLE2P56282 527 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 TBX2Q13207 712 aaPredicted RBP9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 INPP5AQ14642 412 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 PPP1R26Q5T8A7 1209 aaPredicted RBP9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 PLPP4Q5VZY2 271 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 NPNTQ6UXI9 565 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 SYTL1Q8IYJ3 562 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 C4orf32Q8N8J7 132 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 ATAD1Q8NBU5 361 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 HDAC7Q8WUI4 952 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 USP6NLQ92738 828 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 TMEM159Q96B96 161 aa9.96□□□□□ -0.82
GPATCH8-205ENST00000587228 MAGEB10Q96LZ2 347 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms