RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 SIX2Q9NPC8 291 aa13.71□□□□□ -0.21
H3F3B-205ENST00000587171 EVLQ9UI08 416 aaPredicted RBP13.71□□□□□ -0.21
H3F3B-205ENST00000587171 DACH1Q9UI36 760 aa13.71□□□□□ -0.21
H3F3B-205ENST00000587171 NAALADL1Q9UQQ1 740 aa13.71□□□□□ -0.21
H3F3B-205ENST00000587171 TLR6Q9Y2C9 796 aa13.71□□□□□ -0.21
H3F3B-205ENST00000587171 SLC6A4P31645 630 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 HOXD12P35452 270 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 USP8P40818 1118 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 IRX4P78413 519 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 MIIPQ5JXC2 388 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 SYPL2Q5VXT5 272 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 NADSYN1Q6IA69 706 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 METTL3Q86U44 580 aaKnown RBP13.7□□□□□ -0.22
H3F3B-205ENST00000587171 TAC4Q86UU9 113 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 WFDC5Q8TCV5 224 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 SORCS1Q8WY21 1168 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 MKRN2Q9H000 416 aaKnown RBP13.7□□□□□ -0.22
H3F3B-205ENST00000587171 NDST4Q9H3R1 872 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 POPDC2Q9HBU9 364 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 CD93Q9NPY3 652 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 LMBRD1Q9NUN5 540 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 TMEM74BQ9NUR3 256 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 ABCB8Q9NUT2 735 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 AJAP1Q9UKB5 411 aaPredicted RBP13.7□□□□□ -0.22
H3F3B-205ENST00000587171 PILRBQ9UKJ0 227 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 PCDHGC3Q9UN70 934 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 CYP8B1Q9UNU6 501 aa13.7□□□□□ -0.22
H3F3B-205ENST00000587171 CACNA1BQ00975 2339 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 PCDH15Q96QU1 1955 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 SPEGQ15772 3267 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 GOLGA6L7A0A1B0GV03 622 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 IGLV3-25P01717 112 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 ADRB1P08588 477 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 PABPC1P11940 636 aaKnown RBP13.69□□□□□ -0.22
H3F3B-205ENST00000587171 ITPKAP23677 461 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 PRKCHP24723 683 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 YWHAZP63104 245 aaKnown RBP13.69□□□□□ -0.22
H3F3B-205ENST00000587171 ZNF33AQ06730 810 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 TRIM61Q5EBN2 209 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 DPY19L2P1Q6NXN4 242 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 KIAA1324Q6UXG2 1013 aaKnown RBP13.69□□□□□ -0.22
H3F3B-205ENST00000587171 SERPINA13PQ6UXR4 307 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 ADIPOR2Q86V24 386 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 AHI1Q8N157 1196 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 WDTC1Q8N5D0 677 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 ADAM32Q8TC27 787 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 PRICKLE1Q96MT3 831 aaPredicted RBP13.69□□□□□ -0.22
H3F3B-205ENST00000587171 CPXM1Q96SM3 734 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 TUBGCP2Q9BSJ2 902 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 LSM14BQ9BX40 385 aaKnown RBP13.69□□□□□ -0.22
H3F3B-205ENST00000587171 PRDM16Q9HAZ2 1276 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 USP36Q9P275 1121 aaKnown RBP13.69□□□□□ -0.22
H3F3B-205ENST00000587171 TJP2Q9UDY2 1190 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 GGA2Q9UJY4 613 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 DNAJC12Q9UKB3 198 aa13.69□□□□□ -0.22
H3F3B-205ENST00000587171 ATXN2Q99700 1313 aaKnown RBP13.68□□□□□ -0.22
H3F3B-205ENST00000587171 C4orf47A7E2U8 309 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 FOXN3O00409 490 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-205ENST00000587171 CDX4O14627 284 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-205ENST00000587171 CAPN9O14815 690 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 SYNCRIPO60506 623 aaKnown RBP13.68□□□□□ -0.22
H3F3B-205ENST00000587171 TBL1XO60907 577 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 EPHX1P07099 455 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-205ENST00000587171 CLCN1P35523 988 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 COPAP53621 1224 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 ARID5AQ03989 594 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 PTK2Q05397 1052 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 EIF4EBP2Q13542 120 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-205ENST00000587171 VWA3BQ502W6 1294 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 HSP90AA4PQ58FG1 418 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 CT47A1Q5JQC4 288 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-205ENST00000587171 SLC23A3Q6PIS1 610 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 CHST9Q7L1S5 443 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 TMPRSS6Q8IU80 811 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 SLC41A1Q8IVJ1 513 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 ZNF557Q8N988 423 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-205ENST00000587171 HJURPQ8NCD3 748 aaPredicted RBP13.68□□□□□ -0.22
H3F3B-205ENST00000587171 MYEOVQ96EZ4 313 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 DDX50Q9BQ39 737 aaKnown RBP13.68□□□□□ -0.22
H3F3B-205ENST00000587171 NUCKS1Q9H1E3 243 aaKnown RBP13.68□□□□□ -0.22
H3F3B-205ENST00000587171 LHX5Q9H2C1 402 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 TMEM245Q9H330 911 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 TMEM9BQ9NQ34 198 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 CABIN1Q9Y6J0 2220 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 ASPMQ8IZT6 3477 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 FRYQ5TBA9 3013 aa13.68□□□□□ -0.22
H3F3B-205ENST00000587171 NYNRINQ9P2P1 1898 aaKnown RBP13.67□□□□□ -0.22
H3F3B-205ENST00000587171 TRUB2O95900 331 aaKnown RBP13.67□□□□□ -0.22
H3F3B-205ENST00000587171 MOCS2O96007 188 aaPredicted RBP13.67□□□□□ -0.22
H3F3B-205ENST00000587171 IGLV3-19P01714 112 aa13.67□□□□□ -0.22
H3F3B-205ENST00000587171 GLI1P08151 1106 aa13.67□□□□□ -0.22
H3F3B-205ENST00000587171 DLDP09622 509 aaKnown RBP13.67□□□□□ -0.22
H3F3B-205ENST00000587171 PNMA6AP0CW24 399 aaPredicted RBP13.67□□□□□ -0.22
H3F3B-205ENST00000587171 C7P10643 843 aa13.67□□□□□ -0.22
H3F3B-205ENST00000587171 HLA-EP13747 358 aa13.67□□□□□ -0.22
H3F3B-205ENST00000587171 CD6P30203 668 aa13.67□□□□□ -0.22
H3F3B-205ENST00000587171 CD70P32970 193 aa13.67□□□□□ -0.22
H3F3B-205ENST00000587171 RPS24P62847 133 aaKnown RBP13.67□□□□□ -0.22
H3F3B-205ENST00000587171 PITX1P78337 314 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms