RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ANKRD6Q9Y2G4 727 aa12.42□□□□□ -0.42
BRCA1-225ENST00000586385 A0A1B0GVL5 298 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 MSI1O43347 362 aaKnown RBP12.41□□□□□ -0.42
BRCA1-225ENST00000586385 CALUO43852 315 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-225ENST00000586385 PCDHGA12O60330 932 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 SEMA4FO95754 770 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 ZBED1O96006 694 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 CYBBP04839 570 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 IGHV4-34P06331 123 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 ACADMP11310 421 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 PFKFB1P16118 471 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 CTSKP43235 329 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 GRIA4P48058 902 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 CLDN6P56747 220 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 ENPEPQ07075 957 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 PDE4CQ08493 712 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 SMAD1Q15797 465 aaKnown RBP12.41□□□□□ -0.42
BRCA1-225ENST00000586385 INTS8Q75QN2 995 aaKnown RBP12.41□□□□□ -0.42
BRCA1-225ENST00000586385 CHST9Q7L1S5 443 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 RSRC2Q7L4I2 434 aaKnown RBP12.41□□□□□ -0.42
BRCA1-225ENST00000586385 FMNL3Q8IVF7 1028 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 ANKRD52Q8NB46 1076 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 IGSF8Q969P0 613 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 MYEOVQ96EZ4 313 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 IMPG2Q9BZV3 1241 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 EBF2Q9HAK2 575 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 ABCB8Q9NUT2 735 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 SERGEFQ9UGK8 458 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 STRIP2Q9ULQ0 834 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 MYH10P35580 1976 aa12.41□□□□□ -0.42
BRCA1-225ENST00000586385 A0A087WV48 116 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 YJEFN3A6XGL0 299 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 E7ENQ6 273 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 CBX4O00257 560 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 PAPSS1O43252 624 aaPredicted RBP12.4□□□□□ -0.42
BRCA1-225ENST00000586385 TNFSF14O43557 240 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 RHOBTB3O94955 611 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 WNT1P04628 370 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 PABPC1P11940 636 aaKnown RBP12.4□□□□□ -0.42
BRCA1-225ENST00000586385 CD27P26842 260 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 CD70P32970 193 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 IL9RQ01113 521 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 SHBQ15464 509 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 FNDC3BQ53EP0 1204 aaKnown RBP12.4□□□□□ -0.42
BRCA1-225ENST00000586385 MPPE1Q53F39 396 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 MBLAC2Q68D91 279 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 DHRS13Q6UX07 377 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 ARHGAP18Q8N392 663 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 EDEM1Q92611 657 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 EEF2KMTQ96G04 330 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 GGA2Q9UJY4 613 aa12.4□□□□□ -0.42
BRCA1-225ENST00000586385 GOLGA4Q13439 2230 aaKnown RBP12.39□□□□□ -0.43
BRCA1-225ENST00000586385 GOLGA6L7A0A1B0GV03 622 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 WNT9AO14904 365 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 XPO1O14980 1071 aaKnown RBP12.39□□□□□ -0.43
BRCA1-225ENST00000586385 FSBPO95073 299 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 IGLV3-27P01718 113 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 DLDP09622 509 aaKnown RBP12.39□□□□□ -0.43
BRCA1-225ENST00000586385 TRIM21P19474 475 aaKnown RBP12.39□□□□□ -0.43
BRCA1-225ENST00000586385 CMA1P23946 247 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 SLC6A4P31645 630 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 GTF2H1P32780 548 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 PSMC2P35998 433 aaKnown RBP12.39□□□□□ -0.43
BRCA1-225ENST00000586385 GRK6P43250 576 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 CCT8P50990 548 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 ZBTB16Q05516 673 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 ADIGQ0VDE8 80 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 DPYDQ12882 1025 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 GOLGA7BQ2TAP0 167 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 PKDCCQ504Y2 493 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 FAM133BQ5BKY9 247 aaKnown RBP12.39□□□□□ -0.43
BRCA1-225ENST00000586385 PRAMEF14Q5SWL7 426 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 ADGRF1Q5T601 910 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 BSPRYQ5W0U4 402 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 KRT39Q6A163 491 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 RFWD3Q6PCD5 774 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 UBR7Q8N806 425 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 WFIKKN2Q8TEU8 576 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 TMA16Q96EY4 203 aaKnown RBP12.39□□□□□ -0.43
BRCA1-225ENST00000586385 FAXDC2Q96IV6 333 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 ZSWIM1Q9BR11 485 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 BTBD1Q9H0C5 482 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 TSPAN16Q9UKR8 245 aa12.39□□□□□ -0.43
BRCA1-225ENST00000586385 INTS6Q9UL03 887 aaKnown RBP12.39□□□□□ -0.43
BRCA1-225ENST00000586385 HBS1LQ9Y450 684 aaKnown RBP12.39□□□□□ -0.43
BRCA1-225ENST00000586385 FAM237AA0A1B0GTK4 181 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 A0A1B0GTQ1 180 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 MYL1P05976 194 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 KRT13P13646 458 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 HARS2P49590 506 aaKnown RBP12.38□□□□□ -0.43
BRCA1-225ENST00000586385 MXI1P50539 228 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 ADAM9Q13443 819 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 KCNJ12Q14500 433 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 SUZ12Q15022 739 aaKnown RBP12.38□□□□□ -0.43
BRCA1-225ENST00000586385 E2F5Q15329 346 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 CBWD6Q4V339 395 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 CCDC157Q569K6 752 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 CBWD3Q5JTY5 395 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 CBWD5Q5RIA9 395 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 PIK3R6Q5UE93 754 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms