RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 DARS2Q6PI48 645 aaKnown RBP10.76□□□□□ -0.69
LIG3-203ENST00000585370 RHBDF2Q6PJF5 856 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 HFE2Q6ZVN8 426 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 GPRIN1Q7Z2K8 1008 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 CEP57Q86XR8 500 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 RELL1Q8IUW5 271 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 GPR65Q8IYL9 337 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 TSEN2Q8NCE0 465 aaKnown RBP10.76□□□□□ -0.69
LIG3-203ENST00000585370 VN1R2Q8NFZ6 395 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 SLC7A14Q8TBB6 771 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 MICAL1Q8TDZ2 1067 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 SPATA17Q96L03 361 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 TMEM209Q96SK2 561 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 SH3GL2Q99962 352 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 GPR62Q9BZJ7 368 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 PHACTR1Q9C0D0 580 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 PABPC3Q9H361 631 aaKnown RBP10.76□□□□□ -0.69
LIG3-203ENST00000585370 TLE6Q9H808 572 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 TLR9Q9NR96 1032 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 AAASQ9NRG9 546 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 TMEM30AQ9NV96 361 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 MARCH5Q9NX47 278 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 ABI2Q9NYB9 513 aaPredicted RBP10.76□□□□□ -0.69
LIG3-203ENST00000585370 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.76□□□□□ -0.69
LIG3-203ENST00000585370 IL37Q9NZH6 218 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 HSFX1Q9UBD0 423 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 NAALADL1Q9UQQ1 740 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 BACE2Q9Y5Z0 518 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 ZDBF2Q9HCK1 2354 aa10.76□□□□□ -0.69
LIG3-203ENST00000585370 F8W810 466 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 H7C0C1 242 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 AGPSO00116 658 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 EFEMP2O95967 443 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 SLC2A3P11169 496 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 TFE3P19532 575 aaPredicted RBP10.75□□□□□ -0.69
LIG3-203ENST00000585370 OAS2P29728 719 aaKnown RBP10.75□□□□□ -0.69
LIG3-203ENST00000585370 GGCXP38435 758 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 ATP5OP48047 213 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 ITGA8P53708 1063 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 SLC5A3P53794 718 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 YWHAGP61981 247 aaKnown RBP eCLIP10.75□□□□□ -0.69
LIG3-203ENST00000585370 NME3Q13232 169 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 CA9Q16790 459 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 DUSP6Q16828 381 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 RAB6CQ53S08 254 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 PPP6R3Q5H9R7 873 aaPredicted RBP10.75□□□□□ -0.69
LIG3-203ENST00000585370 IZUMO3Q5VZ72 239 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 HIBCHQ6NVY1 386 aaPredicted RBP10.75□□□□□ -0.69
LIG3-203ENST00000585370 BHLHA9Q7RTU4 235 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 HOOK3Q86VS8 718 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 FAM131BQ86XD5 332 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 CDKL3Q8IVW4 592 aaPredicted RBP10.75□□□□□ -0.69
LIG3-203ENST00000585370 SCN4BQ8IWT1 228 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 PQLC3Q8N755 202 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 COLGALT1Q8NBJ5 622 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 PCDH19Q8TAB3 1148 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 RNF139Q8WU17 664 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 UBLCP1Q8WVY7 318 aaPredicted RBP10.75□□□□□ -0.69
LIG3-203ENST00000585370 NDRG1Q92597 394 aaKnown RBP10.75□□□□□ -0.69
LIG3-203ENST00000585370 RTP4Q96DX8 246 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 ZIM3Q96PE6 472 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 CSPG4P5Q96PW8 444 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 KCTD15Q96SI1 283 aaPredicted RBP10.75□□□□□ -0.69
LIG3-203ENST00000585370 FRMD8Q9BZ67 464 aaPredicted RBP10.75□□□□□ -0.69
LIG3-203ENST00000585370 BRD8Q9H0E9 1235 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 RAB6CQ9H0N0 254 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 OSBPL2Q9H1P3 480 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 WDCPQ9H6R7 721 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 FAM204AQ9H8W3 233 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 OLA1Q9NTK5 396 aaKnown RBP10.75□□□□□ -0.69
LIG3-203ENST00000585370 GPATCH2LQ9NWQ4 482 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 DDIT4Q9NX09 232 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 MAFFQ9ULX9 164 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 SHOC2Q9UQ13 582 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 PLAAQ9Y263 795 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 ATP8A1Q9Y2Q0 1164 aa10.75□□□□□ -0.69
LIG3-203ENST00000585370 USP15Q9Y4E8 981 aaPredicted RBP10.75□□□□□ -0.69
LIG3-203ENST00000585370 FAM92AA1XBS5 289 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 A6NNZ2 444 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 LOC730098B7Z3J9 87 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 EIF3HO15372 352 aaKnown RBP eCLIP10.74□□□□□ -0.69
LIG3-203ENST00000585370 NCAM2O15394 837 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 SYF2O95926 243 aaKnown RBP10.74□□□□□ -0.69
LIG3-203ENST00000585370 IFNB1P01574 187 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 IGLV3-25P01717 112 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 NUDT17P0C025 328 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 HAPLN1P10915 354 aaPredicted RBP10.74□□□□□ -0.69
LIG3-203ENST00000585370 CPB1P15086 417 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 LAG3P18627 525 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 TUFMP49411 452 aaKnown RBP10.74□□□□□ -0.69
LIG3-203ENST00000585370 CBX1P83916 185 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 GABPB1Q06547 395 aaPredicted RBP10.74□□□□□ -0.69
LIG3-203ENST00000585370 GPS1Q13098 491 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 CBLBQ13191 982 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 KCNC3Q14003 757 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 CBX2Q14781 532 aaPredicted RBP10.74□□□□□ -0.69
LIG3-203ENST00000585370 TRIP13Q15645 432 aaPredicted RBP10.74□□□□□ -0.69
LIG3-203ENST00000585370 P3H1Q32P28 736 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 TUBB8Q3ZCM7 444 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 OTUD1Q5VV17 481 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms