RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 TMX3Q96JJ7 454 aa8.84□□□□□ -0.99
SRSF1-207ENST00000584668 ZNF578Q96N58 590 aaPredicted RBP8.84□□□□□ -0.99
SRSF1-207ENST00000584668 HNRNPABQ99729 332 aaKnown RBP8.84□□□□□ -0.99
SRSF1-207ENST00000584668 NT5C1AQ9BXI3 368 aa8.84□□□□□ -0.99
SRSF1-207ENST00000584668 UPF2Q9HAU5 1272 aaKnown RBP8.84□□□□□ -0.99
SRSF1-207ENST00000584668 MARCH2Q9P0N8 246 aa8.84□□□□□ -0.99
SRSF1-207ENST00000584668 NUDT5Q9UKK9 219 aa8.84□□□□□ -0.99
SRSF1-207ENST00000584668 AGO1Q9UL18 857 aaKnown RBP8.84□□□□□ -0.99
SRSF1-207ENST00000584668 FZD4Q9ULV1 537 aa8.84□□□□□ -0.99
SRSF1-207ENST00000584668 MYO18BQ8IUG5 2567 aa8.84□□□□□ -0.99
SRSF1-207ENST00000584668 SLC12A8A0AV02 714 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 KCNK3O14649 394 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 CLIC2O15247 247 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 BEST1O76090 585 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 LATS1O95835 1130 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 DLDP09622 509 aaKnown RBP8.83□□□□□ -1
SRSF1-207ENST00000584668 SLFN14P0C7P3 912 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 CKMT2P17540 419 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 POLR2EP19388 210 aaKnown RBP8.83□□□□□ -1
SRSF1-207ENST00000584668 EPHA8P29322 1005 aaPredicted RBP8.83□□□□□ -1
SRSF1-207ENST00000584668 NUDT1P36639 197 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 KIF11P52732 1056 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 RPS14P62263 151 aaKnown RBP8.83□□□□□ -1
SRSF1-207ENST00000584668 KCNH2Q12809 1159 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 DNAJC3Q13217 504 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 LAYNQ6UX15 382 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 GATAD2AQ86YP4 633 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 SPACA3Q8IXA5 215 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 NELFCDQ8IXH7 590 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 PDILTQ8N807 584 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 OR2T34Q8NGX1 318 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 SAP25Q8TEE9 199 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 RNF139Q8WU17 664 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 SORCS1Q8WY21 1168 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 SLC6A18Q96N87 628 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 OMDQ99983 421 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 IRX2Q9BZI1 471 aaPredicted RBP8.83□□□□□ -1
SRSF1-207ENST00000584668 TMEM245Q9H330 911 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 PABPC3Q9H361 631 aaKnown RBP8.83□□□□□ -1
SRSF1-207ENST00000584668 ERVMER34-1Q9H9K5 563 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 NMUR1Q9HB89 426 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 OSER1Q9NX31 292 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 FBXL12Q9NXK8 326 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 GGA2Q9UJY4 613 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 CLIC4Q9Y696 253 aa8.83□□□□□ -1
SRSF1-207ENST00000584668 MORC2Q9Y6X9 1032 aaPredicted RBP8.83□□□□□ -1
SRSF1-207ENST00000584668 ARHGAP6O43182 974 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 TGFB1I1O43294 461 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 MOCS3O95396 460 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 ASLP04424 464 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 C7P10643 843 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 ALPPL2P10696 532 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 PABPC1P11940 636 aaKnown RBP8.82□□□□□ -1
SRSF1-207ENST00000584668 C6P13671 934 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 HOXD9P28356 352 aaPredicted RBP8.82□□□□□ -1
SRSF1-207ENST00000584668 YWHAGP61981 247 aaKnown RBP eCLIP8.82□□□□□ -1
SRSF1-207ENST00000584668 DAB2P98082 770 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 INCA1Q0VD86 236 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 OVGP1Q12889 678 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 PKDCCQ504Y2 493 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 RNF219Q5W0B1 726 aaPredicted RBP8.82□□□□□ -1
SRSF1-207ENST00000584668 UNC13DQ70J99 1090 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 EPM2AIP1Q7L775 607 aaPredicted RBP8.82□□□□□ -1
SRSF1-207ENST00000584668 GPRIN1Q7Z2K8 1008 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 DHX40Q8IX18 779 aaKnown RBP8.82□□□□□ -1
SRSF1-207ENST00000584668 FAM217AQ8IXS0 508 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 C12orf29Q8N999 325 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 FAM181AQ8N9Y4 354 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 IQUBQ8NA54 791 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 CYB5D2Q8WUJ1 264 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 KCNE4Q8WWG9 221 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 RFFLQ8WZ73 363 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 CCDC97Q96F63 343 aaPredicted RBP8.82□□□□□ -1
SRSF1-207ENST00000584668 SERAC1Q96JX3 654 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 CLIC6Q96NY7 704 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 DEPDC7Q96QD5 511 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 DDX50Q9BQ39 737 aaKnown RBP8.82□□□□□ -1
SRSF1-207ENST00000584668 DUSP16Q9BY84 665 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 DPH1Q9BZG8 443 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 RSPH9Q9H1X1 276 aaPredicted RBP8.82□□□□□ -1
SRSF1-207ENST00000584668 CYP3A43Q9HB55 503 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 THSD1Q9NS62 852 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 ABCB8Q9NUT2 735 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 FRMD4BQ9Y2L6 1034 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 HBS1LQ9Y450 684 aaKnown RBP8.82□□□□□ -1
SRSF1-207ENST00000584668 HEMK1Q9Y5R4 338 aaPredicted RBP8.82□□□□□ -1
SRSF1-207ENST00000584668 MGAQ8IWI9 3026 aa8.82□□□□□ -1
SRSF1-207ENST00000584668 LRRIQ3A6PVS8 624 aaPredicted RBP8.81□□□□□ -1
SRSF1-207ENST00000584668 B8ZZF3 427 aa8.81□□□□□ -1
SRSF1-207ENST00000584668 HHLA1C9JL84 531 aa8.81□□□□□ -1
SRSF1-207ENST00000584668 TLR4O00206 839 aa8.81□□□□□ -1
SRSF1-207ENST00000584668 IRAK2O43187 625 aa8.81□□□□□ -1
SRSF1-207ENST00000584668 SLC28A2O43868 658 aa8.81□□□□□ -1
SRSF1-207ENST00000584668 RNASEH2AO75792 299 aaKnown RBP8.81□□□□□ -1
SRSF1-207ENST00000584668 ADH1BP00325 375 aa8.81□□□□□ -1
SRSF1-207ENST00000584668 KLKB1P03952 638 aa8.81□□□□□ -1
SRSF1-207ENST00000584668 IGHV4-34P06331 123 aa8.81□□□□□ -1
SRSF1-207ENST00000584668 ACP1P24666 158 aa8.81□□□□□ -1
SRSF1-207ENST00000584668 HLA-FP30511 346 aa8.81□□□□□ -1
SRSF1-207ENST00000584668 ASPAP45381 313 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms