RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	FAM13C	Q8NE31	585 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	FAM149B1	Q96BN6	582 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TBC1D10A	Q9BXI6	508 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	OCEL1	Q9H607	264 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	GOLGA2P5	Q9HBQ8	144 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	XAB2	Q9HCS7	855 aa	Known RBP	13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	GDAP2	Q9NXN4	497 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	HEY2	Q9UBP5	337 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	GTF2IRD1	Q9UHL9	959 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MFHAS1	Q9Y4C4	1052 aa		13.64	□□□□□ -0.23
CSNK1D-222	ENST00000584377	F2	P00734	622 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ARL4A	P40617	200 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PNPLA4	P41247	253 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	GRIA1	P42261	906 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MATK	P42679	507 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TAF6	P49848	677 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CTC1	Q2NKJ3	1217 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	EFHC1	Q5JVL4	640 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	DENND5B	Q6ZUT9	1274 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	STRADA	Q7RTN6	431 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NPLOC4	Q8TAT6	608 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TFB1M	Q8WVM0	346 aa	Known RBP	13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TMEM40	Q8WWA1	233 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	DNAJB3	Q8WWF6	145 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	HTR3C	Q8WXA8	447 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SLC13A1	Q9BZW2	595 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	DNAI2	Q9GZS0	605 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	RNF39	Q9H2S5	420 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SAR1A	Q9NR31	198 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PLLP	Q9Y342	182 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NR2E3	Q9Y5X4	410 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TRAFD1	O14545	582 aa	Predicted RBP	13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	XPOT	O43592	962 aa	Known RBP	13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	RFPL1	O75677	317 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	AXL	P30530	894 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SEMA5A	Q13591	1074 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PLEKHH3	Q7Z736	793 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ADGRF2	Q8IZF7	708 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	APBB2	Q92870	758 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MTBP	Q96DY7	904 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TMEM120A	Q9BXJ8	343 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PPP1R12C	Q9BZL4	782 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MTO1	Q9Y2Z2	717 aa	Known RBP	13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PCDHGA4	Q9Y5G9	962 aa		13.63	□□□□□ -0.23
CSNK1D-222	ENST00000584377	FAM159B	A6NKW6	160 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	KLF11	O14901	512 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	HUS1	O60921	280 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	DLD	P09622	509 aa	Known RBP	13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	YBX3	P16989	372 aa	Known RBP eCLIP	13.62	□□□□□ -0.23	2e-6	■□□□□ 10.5
CSNK1D-222	ENST00000584377	EPHB2	P29323	1055 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TKT	P29401	623 aa	Known RBP	13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SULT1E1	P49888	294 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MRPS5	P82675	430 aa	Known RBP	13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SOX4	Q06945	474 aa	Predicted RBP	13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SNX17	Q15036	470 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ANKRD23	Q86SG2	305 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PIGZ	Q86VD9	579 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	DEFB106A	Q8N104	65 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NDRG1	Q92597	394 aa	Known RBP	13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TNIP3	Q96KP6	325 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	LGMN	Q99538	433 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NDN	Q99608	321 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	KCNK13	Q9HB14	408 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SPON1	Q9HCB6	807 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	DNAAF2	Q9NVR5	837 aa	Known RBP	13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PHF24	Q9UPV7	400 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	USP3	Q9Y6I4	520 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377		F5H423	210 aa	Predicted RBP	13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	HNRNPCL1	O60812	293 aa	Known RBP	13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	HAUS5	O94927	633 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	VAV1	P15498	845 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PTPN4	P29074	926 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	CCNF	P41002	786 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ZBTB16	Q05516	673 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ADIG	Q0VDE8	80 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MYBPC3	Q14896	1274 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SLC25A52	Q3SY17	297 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SV2C	Q496J9	727 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PABPC1L	Q4VXU2	614 aa	Known RBP	13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MROH9	Q5TGP6	573 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	ZNF333	Q96JL9	665 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	OLFM3	Q96PB7	478 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	MECR	Q9BV79	373 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	FZD10	Q9ULW2	581 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PCDHA11	Q9Y5I1	949 aa		13.62	□□□□□ -0.23
CSNK1D-222	ENST00000584377		A0A0A0MRY4	1105 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	XPO1	O14980	1071 aa	Known RBP	13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	NVL	O15381	856 aa	Known RBP	13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	DGKI	O75912	1065 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	IL1B	P01584	269 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	KCNE1	P15382	129 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TPP2	P29144	1249 aa	Predicted RBP	13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	SERPINB3	P29508	390 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	HIC1	Q14526	733 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	DCAF6	Q58WW2	860 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	PRAMEF19	Q5SWL8	479 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	B3GALNT2	Q8NCR0	500 aa		13.61	□□□□□ -0.23
CSNK1D-222	ENST00000584377	TTC8	Q8TAM2	541 aa		13.61	□□□□□ -0.23

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