RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 JRKLQ9Y4A0 524 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 DENND4AQ7Z401 1863 aa11.36□□□□□ -0.59
TOP3A-216ENST00000583804 E2F8A0AVK6 867 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 KCNU1A8MYU2 1149 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 ANHXE9PGG2 379 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 PI4K2BG5E9Z4 385 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 ECI2O75521 394 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 KRT1P04264 644 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 PSMC3P17980 439 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 PCK1P35558 622 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 SLC11A2P49281 568 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 USP4Q13107 963 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 ATP13A4Q4VNC1 1196 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 KCNT1Q5JUK3 1230 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 HTR3DQ70Z44 454 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 ADHFE1Q8IWW8 467 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 BBS7Q8IWZ6 715 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 COG1Q8WTW3 980 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 HSPH1Q92598 858 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 ALG3Q92685 438 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 MS4A14Q96JA4 679 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 ZFYVE19Q96K21 471 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 PEBP4Q96S96 227 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 SIK2Q9H0K1 926 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 L2HGDHQ9H9P8 463 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 KCNK12Q9HB15 430 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 ANLNQ9NQW6 1124 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 TMPRSS4Q9NRS4 437 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 DUS2Q9NX74 493 aaKnown RBP11.35□□□□□ -0.59
TOP3A-216ENST00000583804 OBP2AQ9NY56 170 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 PRKAG3Q9UGI9 489 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 AGO1Q9UL18 857 aaKnown RBP11.35□□□□□ -0.59
TOP3A-216ENST00000583804 USP18Q9UMW8 372 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 ZNF510Q9Y2H8 683 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 WNT6Q9Y6F9 365 aa11.35□□□□□ -0.59
TOP3A-216ENST00000583804 GOLGA6L7A0A1B0GV03 622 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 LOC730098B7Z3J9 87 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 SLC9A3R1O14745 358 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-216ENST00000583804 DDX3YO15523 660 aaKnown RBP11.34□□□□□ -0.59
TOP3A-216ENST00000583804 ACSL4O60488 711 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 GREM1O60565 184 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 PAGE1O75459 146 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 ASGR2P07307 311 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 BMP1P13497 986 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 TCF3P15923 654 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 IL1R2P27930 398 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 GDI1P31150 447 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 MAN1A1P33908 653 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 ADRA1BP35368 520 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 GGCXP38435 758 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 SLC1A1P43005 524 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 IFNAR2P48551 515 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 HADHQ16836 314 aaKnown RBP11.34□□□□□ -0.59
TOP3A-216ENST00000583804 DCAF12L1Q5VU92 463 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 ADAT2Q7Z6V5 191 aaKnown RBP11.34□□□□□ -0.59
TOP3A-216ENST00000583804 CCDC185Q8N715 623 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 OSCP1Q8WVF1 389 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 NXPE3Q969Y0 559 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 BTN2A3PQ96KV6 586 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 OSBPL9Q96SU4 736 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 TRMT61BQ9BVS5 477 aaKnown RBP11.34□□□□□ -0.59
TOP3A-216ENST00000583804 LINC00597Q9H2U6 94 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 ARHGEF38Q9NXL2 777 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 IGSF9Q9P2J2 1179 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 TBC1D14Q9P2M4 693 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 XPO7Q9UIA9 1087 aaKnown RBP11.34□□□□□ -0.59
TOP3A-216ENST00000583804 SNX12Q9UMY4 172 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 SNX10Q9Y5X0 201 aa11.34□□□□□ -0.59
TOP3A-216ENST00000583804 DOCK8Q8NF50 2099 aa11.33□□□□□ -0.59
TOP3A-216ENST00000583804 DLL1O00548 723 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 TRDMT1O14717 391 aaKnown RBP11.33□□□□□ -0.6
TOP3A-216ENST00000583804 CEP104O60308 925 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 ZP2Q05996 745 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 MTA1Q13330 715 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 KCTD19Q17RG1 926 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-216ENST00000583804 EFHC2Q5JST6 749 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 ADGRF1Q5T601 910 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 ERMARDQ5T6L9 678 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 RAP1GAP2Q684P5 730 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 TRIM68Q6AZZ1 485 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 Q6ZNB5 142 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 CHSY1Q86X52 802 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 CCDC50Q8IVM0 306 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 SLC44A3Q8N4M1 653 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 UBL4BQ8N7F7 174 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 DEPDC1BQ8WUY9 529 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 AZIN2Q96A70 460 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 RNF25Q96BH1 459 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-216ENST00000583804 HAPLN3Q96S86 360 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 DDX50Q9BQ39 737 aaKnown RBP11.33□□□□□ -0.6
TOP3A-216ENST00000583804 MAGEB5Q9BZ81 275 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 BRD9Q9H8M2 597 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 FZD10Q9ULW2 581 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 PRUNE2Q8WUY3 3088 aa11.33□□□□□ -0.6
TOP3A-216ENST00000583804 I6L893 689 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-216ENST00000583804 TSPAN3O60637 253 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 LATS1O95835 1130 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 RARAP10276 462 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 TACR2P21452 398 aa11.32□□□□□ -0.6
TOP3A-216ENST00000583804 CTNNA1P35221 906 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms