RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 MYO15AQ9UKN7 3530 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 PRRT4C9JH25 899 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 SGK1O00141 431 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 GFRA2O00451 464 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 GFRA3O60609 400 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 APBB3O95704 486 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 SLC2A3P11169 496 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 UNGP13051 313 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 ABCB4P21439 1286 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 WASP42768 502 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 GEN1Q17RS7 908 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 PIK3R6Q5UE93 754 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 SFMBT2Q5VUG0 894 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 EGFLAMQ63HQ2 1017 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 RAP1GAP2Q684P5 730 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 SND1Q7KZF4 910 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 ASCL5Q7RTU5 278 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 IRF2BP2Q7Z5L9 587 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 ANKS1BQ7Z6G8 1248 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 CHPFQ8IZ52 775 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 CAMKK1Q8N5S9 505 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 HJURPQ8NCD3 748 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 RNF214Q8ND24 703 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 KCNV2Q8TDN2 545 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 PRICKLE1Q96MT3 831 aaPredicted RBP13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 DCBLD2Q96PD2 775 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 RRN3Q9NYV6 651 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 ADAM22Q9P0K1 906 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 SLC27A6Q9Y2P4 619 aa13.07□□□□□ -0.32
SMARCE1-218ENST00000582955 PRR23AA6NEV1 266 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 KCNU1A8MYU2 1149 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 F5H5T6 163 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 LILRB5O75023 590 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 LMNAP02545 664 aaKnown RBP13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 TPM3P06753 285 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 CHRM1P11229 460 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 TFE3P19532 575 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 TACR2P21452 398 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 TNFAIP3P21580 790 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 HOXA6P31267 233 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 FLT3P36888 993 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 DGKEP52429 567 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 CENPCQ03188 943 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 DEUP1Q05D60 604 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 SRSF5Q13243 272 aaKnown RBP13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 EIF4EBP2Q13542 120 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 CRY1Q16526 586 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 MS4A13Q5J8X5 152 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 OTUD1Q5VV17 481 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 SDE2Q6IQ49 451 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 WDR5BQ86VZ2 330 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 MFN1Q8IWA4 741 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 CCDC117Q8IWD4 279 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 LGI2Q8N0V4 545 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 CFAP52Q8N1V2 620 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 EMC1Q8N766 993 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 UCMAQ8WVF2 138 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 MYEOVQ96EZ4 313 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 TBCBQ99426 244 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 NPY6RQ99463 290 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 NUP58Q9BVL2 599 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 IRX2Q9BZI1 471 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 EDEM3Q9BZQ6 932 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 CIPCQ9C0C6 399 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 TTYH3Q9C0H2 523 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 POLMQ9NP87 494 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 STARD13Q9Y3M8 1113 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 FANCMQ8IYD8 2048 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 VPS13AQ96RL7 3174 aa13.06□□□□□ -0.32
SMARCE1-218ENST00000582955 AXIN1O15169 862 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 ADAM23O75077 832 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 ALDH1A2O94788 518 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 F9P00740 461 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 CALB1P05937 261 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 HOXB2P14652 356 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 HLA-FP30511 346 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 NTSR1P30989 418 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 PBX1P40424 430 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 RPS24P62847 133 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 KLHL30Q0D2K2 578 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 PTP4A2Q12974 167 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 SLC25A52Q3SY17 297 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 FIGNQ5HY92 759 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 MPP7Q5T2T1 576 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 E4F1Q66K89 784 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 ANO7Q6IWH7 933 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 TMEM92Q6UXU6 159 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 PRR23BQ6ZRT6 265 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 CEP68Q76N32 757 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 PHF13Q86YI8 300 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 CARNMT1Q8N4J0 409 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 ZNF557Q8N988 423 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 CPLX3Q8WVH0 158 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 CFAP57Q96MR6 1250 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 ACOX2Q99424 681 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 SELENOOQ9BVL4 669 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 XPO4Q9C0E2 1151 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 HAUS4Q9H6D7 363 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 WDCPQ9H6R7 721 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 PIGVQ9NUD9 493 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms