RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 ADAMTS19Q8TE59 1207 aa12.43□□□□□ -0.42
CCDC57-216ENST00000582885 MAIP1Q8WWC4 291 aa12.43□□□□□ -0.42
CCDC57-216ENST00000582885 ACSF2Q96CM8 615 aaPredicted RBP12.43□□□□□ -0.42
CCDC57-216ENST00000582885 RIPOR3Q96MK2 946 aa12.43□□□□□ -0.42
CCDC57-216ENST00000582885 KCTD15Q96SI1 283 aaPredicted RBP12.43□□□□□ -0.42
CCDC57-216ENST00000582885 RETREG1Q9H6L5 497 aa12.43□□□□□ -0.42
CCDC57-216ENST00000582885 GKN1Q9NS71 199 aa12.43□□□□□ -0.42
CCDC57-216ENST00000582885 KLHL11Q9NVR0 708 aa12.43□□□□□ -0.42
CCDC57-216ENST00000582885 GPATCH2LQ9NWQ4 482 aa12.43□□□□□ -0.42
CCDC57-216ENST00000582885 GDE1Q9NZC3 331 aa12.43□□□□□ -0.42
CCDC57-216ENST00000582885 STOML2Q9UJZ1 356 aa12.43□□□□□ -0.42
CCDC57-216ENST00000582885 ZNF510Q9Y2H8 683 aa12.43□□□□□ -0.42
CCDC57-216ENST00000582885 CPQQ9Y646 472 aa12.43□□□□□ -0.42
CCDC57-216ENST00000582885 CDH23Q9H251 3354 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 PI4K2BG5E9Z4 385 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 H3BRJ5 948 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 ACSL4O60488 711 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 GREM1O60565 184 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 TJP3O95049 919 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 CD48P09326 243 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 CEBPBP17676 345 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 ARL4AP40617 200 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 DLX2Q07687 328 aaPredicted RBP12.42□□□□□ -0.42
CCDC57-216ENST00000582885 KLF1Q13351 362 aaPredicted RBP12.42□□□□□ -0.42
CCDC57-216ENST00000582885 TFDP2Q14188 446 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 C5orf22Q49AR2 442 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 ANKRD20A8PQ5CZ79 823 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 PPP6R3Q5H9R7 873 aaPredicted RBP12.42□□□□□ -0.42
CCDC57-216ENST00000582885 CCDC181Q5TID7 509 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 MANEALQ5VSG8 457 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 Q6ZNB5 142 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 HTR3DQ70Z44 454 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 FAM217AQ8IXS0 508 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 PYROXD2Q8N2H3 581 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 ITFG1Q8TB96 612 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 FAM161BQ96MY7 647 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 NECTIN4Q96NY8 510 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 RNF157Q96PX1 679 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 EPAS1Q99814 870 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 PRMT1Q99873 361 aaKnown RBP12.42□□□□□ -0.42
CCDC57-216ENST00000582885 DDX50Q9BQ39 737 aaKnown RBP12.42□□□□□ -0.42
CCDC57-216ENST00000582885 CALN1Q9BXU9 219 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 KIF9Q9HAQ2 790 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 TMPRSS4Q9NRS4 437 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 TDP1Q9NUW8 608 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 CWC15Q9P013 229 aaKnown RBP12.42□□□□□ -0.42
CCDC57-216ENST00000582885 PPARGC1AQ9UBK2 798 aaKnown RBP12.42□□□□□ -0.42
CCDC57-216ENST00000582885 LSM7Q9UK45 103 aaKnown RBP12.42□□□□□ -0.42
CCDC57-216ENST00000582885 HS3ST4Q9Y661 456 aa12.42□□□□□ -0.42
CCDC57-216ENST00000582885 ZFP37Q9Y6Q3 630 aaPredicted RBP12.42□□□□□ -0.42
CCDC57-216ENST00000582885 IGLV3-10A0A075B6K4 115 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 E2F8A0AVK6 867 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 FGGP02679 453 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 KLKB1P03952 638 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 HMBSP08397 361 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 ZFXP17010 805 aaPredicted RBP12.41□□□□□ -0.42
CCDC57-216ENST00000582885 CORO1AP31146 461 aaKnown RBP12.41□□□□□ -0.42
CCDC57-216ENST00000582885 HOXC13P31276 330 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 ZXDBP98169 803 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 DPYSQ14117 519 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 MS4A13Q5J8X5 152 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 HABP4Q5JVS0 413 aaKnown RBP12.41□□□□□ -0.42
CCDC57-216ENST00000582885 ARTNQ5T4W7 220 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 ADGRF1Q5T601 910 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 PIK3R6Q5UE93 754 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 SLC9A4Q6AI14 798 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 AADACL2Q6P093 401 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 BBS12Q6ZW61 710 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 ANKS1BQ7Z6G8 1248 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 NPAS3Q8IXF0 933 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 ZNF683Q8IZ20 524 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 MICALL1Q8N3F8 863 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 SMRP1Q8NCR6 262 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 MNS1Q8NEH6 495 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 FGF13Q92913 245 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 USP13Q92995 863 aaPredicted RBP12.41□□□□□ -0.42
CCDC57-216ENST00000582885 MS4A14Q96JA4 679 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 RPGRIP1Q96KN7 1286 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 CAPZA3Q96KX2 299 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 CSPG4P5Q96PW8 444 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 CDX2Q99626 313 aaPredicted RBP12.41□□□□□ -0.42
CCDC57-216ENST00000582885 MAK16Q9BXY0 300 aaKnown RBP12.41□□□□□ -0.42
CCDC57-216ENST00000582885 MAGEB5Q9BZ81 275 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 SLITRK6Q9H5Y7 841 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 TRPV4Q9HBA0 871 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 SMPD4Q9NXE4 827 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 STIM2Q9P246 746 aa12.41□□□□□ -0.42
CCDC57-216ENST00000582885 NYNRINQ9P2P1 1898 aaKnown RBP12.41□□□□□ -0.42
CCDC57-216ENST00000582885 AGO1Q9UL18 857 aaKnown RBP12.41□□□□□ -0.42
CCDC57-216ENST00000582885 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.4□□□□□ -0.42
CCDC57-216ENST00000582885 DRGXA6NNA5 263 aa12.4□□□□□ -0.42
CCDC57-216ENST00000582885 FAM72CH0Y354 149 aa12.4□□□□□ -0.42
CCDC57-216ENST00000582885 CCDC188H7C350 402 aa12.4□□□□□ -0.42
CCDC57-216ENST00000582885 LEFTY2O00292 366 aa12.4□□□□□ -0.42
CCDC57-216ENST00000582885 PDE2AO00408 941 aaPredicted RBP12.4□□□□□ -0.42
CCDC57-216ENST00000582885 EEF2KO00418 725 aaKnown RBP12.4□□□□□ -0.42
CCDC57-216ENST00000582885 FGF10O15520 208 aaPredicted RBP12.4□□□□□ -0.42
CCDC57-216ENST00000582885 LRIG2O94898 1065 aa12.4□□□□□ -0.42
CCDC57-216ENST00000582885 MOCS2O96007 188 aaPredicted RBP12.4□□□□□ -0.42
CCDC57-216ENST00000582885 KRT10P13645 584 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms