RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 HACD1B0YJ81 288 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 TNFRSF10AO00220 468 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 PPP1R12AO14974 1030 aaPredicted RBP9.6□□□□□ -0.87
SS18-220ENST00000582092 RGS16O15492 202 aaPredicted RBP9.6□□□□□ -0.87
SS18-220ENST00000582092 CSPG5O95196 566 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 GALTP07902 379 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 SLC2A3P11169 496 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 BMP1P13497 986 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 ETS1P14921 441 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 TFE3P19532 575 aaPredicted RBP9.6□□□□□ -0.87
SS18-220ENST00000582092 AMPD1P23109 780 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 CA8P35219 290 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 PHBP35232 272 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 MAGEA11P43364 429 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 SLC5A3P53794 718 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 COG7P83436 770 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 SLC29A2Q14542 456 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 PDK1Q15118 436 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 CA9Q16790 459 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 USP41Q3LFD5 358 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 MGAT5BQ3V5L5 792 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 RAB6CQ53S08 254 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 AGBL2Q5U5Z8 902 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 SYPL2Q5VXT5 272 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 SLC9A4Q6AI14 798 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 HIBCHQ6NVY1 386 aaPredicted RBP9.6□□□□□ -0.87
SS18-220ENST00000582092 ARHGEF18Q6ZSZ5 1173 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 HFE2Q6ZVN8 426 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 ZNF771Q7L3S4 317 aaPredicted RBP9.6□□□□□ -0.87
SS18-220ENST00000582092 GPRIN1Q7Z2K8 1008 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 MON1AQ86VX9 555 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 PALM2Q8IXS6 379 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 PDIK1LQ8N165 341 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 ZCCHC9Q8N567 271 aaKnown RBP9.6□□□□□ -0.87
SS18-220ENST00000582092 CCNYQ8ND76 341 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 ZMIZ2Q8NF64 920 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 PCDH19Q8TAB3 1148 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 ADAM32Q8TC27 787 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 SPPL2BQ8TCT7 592 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 TFB1MQ8WVM0 346 aaKnown RBP9.6□□□□□ -0.87
SS18-220ENST00000582092 NTAN1Q96AB6 310 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 ATP6V1G3Q96LB4 118 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 CSPG4P5Q96PW8 444 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 RBM15Q96T37 977 aaKnown RBP eCLIP9.6□□□□□ -0.87
SS18-220ENST00000582092 SEPT5Q99719 369 aaPredicted RBP9.6□□□□□ -0.87
SS18-220ENST00000582092 ROPN1BQ9BZX4 212 aaPredicted RBP9.6□□□□□ -0.87
SS18-220ENST00000582092 KLC2Q9H0B6 622 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 RAB6CQ9H0N0 254 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 SEMA4AQ9H3S1 761 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 ROPN1Q9HAT0 212 aaPredicted RBP9.6□□□□□ -0.87
SS18-220ENST00000582092 TMBIM4Q9HC24 238 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 SAYSD1Q9NPB0 183 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 OLA1Q9NTK5 396 aaKnown RBP9.6□□□□□ -0.87
SS18-220ENST00000582092 COMMD8Q9NX08 183 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 ADAM21Q9UKJ8 722 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 SHOC2Q9UQ13 582 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 SSX2IPQ9Y2D8 614 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 CDH23Q9H251 3354 aa9.6□□□□□ -0.87
SS18-220ENST00000582092 BCLAF3A2AJT9 711 aaKnown RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 NT5C1B-RDH14C9J2C7 533 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 HHLA1C9JL84 531 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 F8W810 466 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 AGPSO00116 658 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 RASGRF2O14827 1237 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 EIF3HO15372 352 aaKnown RBP eCLIP9.59□□□□□ -0.87
SS18-220ENST00000582092 NCAM2O15394 837 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 RIPK2O43353 540 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 NEBLO76041 1014 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 ACSL3O95573 720 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 ZSCAN5DPP0CG00 497 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 PECAM1P16284 738 aaPredicted RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 GOT1P17174 413 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 FGFR3P22607 806 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 IVDP26440 423 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 YWHAQP27348 245 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 CCR1P32246 355 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 SERPINB6P35237 376 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 RPL22P35268 128 aaKnown RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 MAGEA4P43358 317 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 NRIP1P48552 1158 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 HCAR3P49019 387 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 TUFMP49411 452 aaKnown RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 PSEN1P49768 467 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 KCNQ1P51787 676 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 ATXN1P54253 815 aaKnown RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 CACNA2D1P54289 1103 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 AP1B1Q10567 949 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 HIF1AQ16665 826 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 KCTD19Q17RG1 926 aaPredicted RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 SLC45A4Q5BKX6 768 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 BRMS1LQ5PSV4 323 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 KCTD16Q68DU8 428 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 PTCRAQ6ISU1 281 aaPredicted RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 RWDD4Q6NW29 188 aaKnown RBP9.59□□□□□ -0.87
SS18-220ENST00000582092 LEKR1Q6ZMV7 388 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 RFX8Q6ZV50 586 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 BEND5Q7L4P6 421 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 TADA2BQ86TJ2 420 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 UNC45BQ8IWX7 931 aa9.59□□□□□ -0.87
SS18-220ENST00000582092 SLC39A11Q8N1S5 342 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms