RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 CDK5RAP1Q96SZ6 601 aaKnown RBP10.12□□□□□ -0.79
TOP3A-211ENST00000581536 DCLK3Q9C098 648 aa10.12□□□□□ -0.79
TOP3A-211ENST00000581536 DUSP15Q9H1R2 295 aaPredicted RBP10.12□□□□□ -0.79
TOP3A-211ENST00000581536 OLA1Q9NTK5 396 aaKnown RBP10.12□□□□□ -0.79
TOP3A-211ENST00000581536 EBF1Q9UH73 591 aa10.12□□□□□ -0.79
TOP3A-211ENST00000581536 DACH1Q9UI36 760 aa10.12□□□□□ -0.79
TOP3A-211ENST00000581536 RAB23Q9ULC3 237 aa10.12□□□□□ -0.79
TOP3A-211ENST00000581536 STRIP2Q9ULQ0 834 aa10.12□□□□□ -0.79
TOP3A-211ENST00000581536 ZNF510Q9Y2H8 683 aa10.12□□□□□ -0.79
TOP3A-211ENST00000581536 GVINP1Q7Z2Y8 2422 aa10.12□□□□□ -0.79
TOP3A-211ENST00000581536 CCDC163A0A0D9SF12 145 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 FAM187AA6NFU0 413 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.11□□□□□ -0.79
TOP3A-211ENST00000581536 E5RJQ4 531 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 J3QL48 77 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 MED7O43513 233 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 PENKP01210 267 aaPredicted RBP10.11□□□□□ -0.79
TOP3A-211ENST00000581536 BCKDHBP21953 392 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 SLC6A4P31645 630 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 CHKAP35790 457 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 DRAP1Q14919 205 aaPredicted RBP10.11□□□□□ -0.79
TOP3A-211ENST00000581536 TMEM215Q68D42 235 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 LAIR1Q6GTX8 287 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 KIAA1211LQ6NV74 962 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 MSANTD2Q6P1R3 559 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 RFWD3Q6PCD5 774 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 TMEM110Q86TL2 294 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 FAM114A1Q8IWE2 563 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 FAM217AQ8IXS0 508 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 MDGA1Q8NFP4 955 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 TSTD1Q8NFU3 115 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 DDI1Q8WTU0 396 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 SORCS1Q8WY21 1168 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 ACDQ96AP0 544 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 PLD4Q96BZ4 506 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 RMDN1Q96DB5 314 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 CPXM1Q96SM3 734 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 OCSTAMPQ9BR26 566 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 LSM14BQ9BX40 385 aaKnown RBP10.11□□□□□ -0.79
TOP3A-211ENST00000581536 NAA15Q9BXJ9 866 aaKnown RBP10.11□□□□□ -0.79
TOP3A-211ENST00000581536 SLC6A17Q9H1V8 727 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 ARRDC1-AS1Q9H2J1 176 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 SMOC1Q9H4F8 434 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 TMEM63CQ9P1W3 806 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 STARD13Q9Y3M8 1113 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 HBS1LQ9Y450 684 aaKnown RBP10.11□□□□□ -0.79
TOP3A-211ENST00000581536 FHOD1Q9Y613 1164 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 RAD54BQ9Y620 910 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 TNRC6BQ9UPQ9 1833 aaKnown RBP10.11□□□□□ -0.79
TOP3A-211ENST00000581536 PLXND1Q9Y4D7 1925 aa10.11□□□□□ -0.79
TOP3A-211ENST00000581536 A0A1W2PQF6 199 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 GFRA2O00451 464 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 GRAP2O75791 330 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 FBXO21O94952 628 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 IGLV3-27P01718 113 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 RETP07949 1114 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 NTSR1P30989 418 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 HARS2P49590 506 aaKnown RBP10.1□□□□□ -0.79
TOP3A-211ENST00000581536 TBX4P57082 545 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 RAPGEF1Q13905 1077 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 KRT31Q15323 416 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 RSPO4Q2I0M5 234 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-211ENST00000581536 PLK5Q496M5 336 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 CT47A1Q5JQC4 288 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-211ENST00000581536 EOGTQ5NDL2 527 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 ADGRF1Q5T601 910 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 CDKAL1Q5VV42 579 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 NADSYN1Q6IA69 706 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 SASS6Q6UVJ0 657 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 CACNA2D4Q7Z3S7 1137 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-211ENST00000581536 RASSF3Q86WH2 238 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 FAM71AQ8IYT1 594 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 PGBD3Q8N328 593 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 CPXM2Q8N436 756 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 DEFB119Q8N690 84 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 CCDC26Q8TAB7 109 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 DQX1Q8TE96 717 aaKnown RBP10.1□□□□□ -0.79
TOP3A-211ENST00000581536 STK32AQ8WU08 396 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 FAM149B1Q96BN6 582 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 TMA16Q96EY4 203 aaKnown RBP10.1□□□□□ -0.79
TOP3A-211ENST00000581536 ZC3H10Q96K80 434 aaKnown RBP10.1□□□□□ -0.79
TOP3A-211ENST00000581536 PPP1R13BQ96KQ4 1090 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 FCRL2Q96LA5 508 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-211ENST00000581536 HSD3B7Q9H2F3 369 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 CACNA2D2Q9NY47 1150 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 XPO7Q9UIA9 1087 aaKnown RBP10.1□□□□□ -0.79
TOP3A-211ENST00000581536 GMEB2Q9UKD1 530 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 USP18Q9UMW8 372 aa10.1□□□□□ -0.79
TOP3A-211ENST00000581536 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.1□□□□□ -0.79
TOP3A-211ENST00000581536 CKAP5Q14008 2032 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 TCRBV21S2A2A0A5A6 115 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 EPHB6O15197 1021 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 ACSL4O60488 711 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 ERBB2P04626 1255 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 GABRG2P18507 467 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 HOXD9P28356 352 aaPredicted RBP10.09□□□□□ -0.79
TOP3A-211ENST00000581536 ACADSBP45954 432 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 ID4P47928 161 aa10.09□□□□□ -0.79
TOP3A-211ENST00000581536 PDCLQ13371 301 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms