RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 TCEA3O75764 348 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 LARGE1O95461 756 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 FAM90A15PP0C7V4 464 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 FAM90A14PP0C7W9 464 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 PEPDP12955 493 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 RPL15P61313 204 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 YPEL5P62699 121 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 RNASELQ05823 741 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 FOXO1Q12778 655 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 RPS6KA2Q15349 733 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 EZH2Q15910 746 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 MEX3CQ5U5Q3 659 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 NFRKBQ6P4R8 1299 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 RAB11FIP2Q7L804 512 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 TFAP2DQ7Z6R9 452 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 SRFBP1Q8NEF9 429 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 STT3BQ8TCJ2 826 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 CELF1Q92879 486 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 ZNF845Q96IR2 970 aaPredicted RBP5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 GPR78Q96P69 363 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 SENP7Q9BQF6 1050 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 TRIM2Q9C040 744 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 VPS16Q9H269 839 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 PRDM16Q9HAZ2 1276 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 PRDM8Q9NQV8 689 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 LIN7CQ9NUP9 197 aaKnown RBP5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 TRPC5Q9UL62 973 aaPredicted RBP5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 DAPP1Q9UN19 280 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 B3GNT3Q9Y2A9 372 aa5.17□□□□□ -1.58
SMCHD1-204ENST00000581226 TBC1D3DA0A087WVF3 549 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 TBC1D3IA0A087WXS9 549 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 TBC1D3EA0A087X179 549 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 CYP2D7A0A087X1C5 515 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 TBC1D3KA0A087X1G2 549 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 TBC1D3BA6NDS4 549 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 TBC1D3FA6NER0 549 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 KCNU1A8MYU2 1149 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 TBC1D3LB9A6J9 549 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 ENO1P06733 434 aaKnown RBP5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 TBC1D3HP0C7X1 549 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 ATP5F1P24539 256 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 GRK5P34947 590 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 IDUAP35475 653 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 ZNF84P51523 738 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 PNLIPRP1P54315 467 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 RBM6P78332 1123 aaKnown RBP5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 GHRHRQ02643 423 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 MTA1Q13330 715 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 DAZAP2Q15038 168 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 TIGD6Q17RP2 521 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 GLE1Q53GS7 698 aaKnown RBP5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 MTX3Q5HYI7 312 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 TBC1D3GQ6DHY5 549 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 TBC1D3CQ6IPX1 549 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 ANO7Q6IWH7 933 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 TBC1D3Q8IZP1 549 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 OTUD7AQ8TE49 926 aaPredicted RBP5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 PIGKQ92643 395 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 TRMT61AQ96FX7 289 aaKnown RBP5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 FCRL5Q96RD9 977 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 TM2D2Q9BX73 214 aa5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 ELAC1Q9H777 363 aaKnown RBP5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 AGO4Q9HCK5 861 aaKnown RBP5.16□□□□□ -1.58
SMCHD1-204ENST00000581226 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 HMX3A6NHT5 357 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 SLC38A8A6NNN8 435 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 INPPL1O15357 1258 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 NBNO60934 754 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 KAT7O95251 611 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 PLAUP00749 431 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 CYP3A4P08684 503 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 FAM3BP58499 235 aaPredicted RBP5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 TAS2R50P59544 299 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 TLE3Q04726 772 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 ZNF626Q68DY1 528 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 TANGO2Q6ICL3 276 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 ERAP2Q6P179 960 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 SLC2A7Q6PXP3 512 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 DHRS13Q6UX07 377 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 RFX6Q8HWS3 928 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 UEVLDQ8IX04 471 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 CCT6BQ92526 530 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 RUBCNQ92622 972 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 C3orf49Q96BT1 292 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 P2RY11Q96G91 374 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 TRAPPC9Q96Q05 1148 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 PRSS22Q9GZN4 317 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 PI4KBQ9UBF8 816 aa5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 C19orf53Q9UNZ5 99 aaPredicted RBP5.15□□□□□ -1.59
SMCHD1-204ENST00000581226 IFRD1O00458 451 aaPredicted RBP5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 TP73O15350 636 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 USP12O75317 370 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 BCAR3O75815 825 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 ALDOAP04075 364 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 CD63P08962 238 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 ST6GAL1P15907 406 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 GRK6P43250 576 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 SLC37A1P57057 533 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 FOXL2P58012 376 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms