RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 PSTPIP1O43586 416 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 PRPSAP2O60256 369 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 ACSL4O60488 711 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 KLKB1P03952 638 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 KRT7P08729 469 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 BMP1P13497 986 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 MSNP26038 577 aaKnown RBP10.78□□□□□ -0.68
CCDC47-203ENST00000580986 MIPP30301 263 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 KCNQ1P51787 676 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 MLLT6P55198 1093 aaPredicted RBP10.78□□□□□ -0.68
CCDC47-203ENST00000580986 MESDQ14696 234 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 PDGFRLQ15198 375 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 DPYSL2Q16555 572 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 C5orf22Q49AR2 442 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 ZC3H12AQ5D1E8 599 aaKnown RBP10.78□□□□□ -0.68
CCDC47-203ENST00000580986 MPP7Q5T2T1 576 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 ADGRF1Q5T601 910 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 ERMARDQ5T6L9 678 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 SH3PXD2AQ5TCZ1 1133 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 TTC39BQ5VTQ0 682 aaPredicted RBP10.78□□□□□ -0.68
CCDC47-203ENST00000580986 RNF43Q68DV7 783 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 TANGO2Q6ICL3 276 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 CC2D1AQ6P1N0 951 aaPredicted RBP10.78□□□□□ -0.68
CCDC47-203ENST00000580986 PARM1Q6UWI2 310 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 VITQ6UXI7 678 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 DAAM2Q86T65 1068 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 FAM131BQ86XD5 332 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 CCAR2Q8N163 923 aaKnown RBP10.78□□□□□ -0.68
CCDC47-203ENST00000580986 RIN3Q8TB24 985 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 FAM71BQ8TC56 605 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 CD101Q93033 1021 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 ALS2CR12Q96Q35 445 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 FAM83CQ9BQN1 747 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 TKTL2Q9H0I9 626 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 PRDM6Q9NQX0 595 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 GKN1Q9NS71 199 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 TRIM10Q9UDY6 481 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 AGO1Q9UL18 857 aaKnown RBP10.78□□□□□ -0.68
CCDC47-203ENST00000580986 PYCARDQ9ULZ3 195 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 TFR2Q9UP52 801 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 ZKSCAN5Q9Y2L8 839 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 ALG6Q9Y672 507 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 NUMBLQ9Y6R0 609 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 IGLV3-10A0A075B6K4 115 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 A0A0U1RQJ8 604 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 MACROD2A1Z1Q3 448 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 CCDC66A2RUB6 948 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 GRID2IPA4D2P6 1211 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 MIF4GDA9UHW6 222 aaKnown RBP10.77□□□□□ -0.69
CCDC47-203ENST00000580986 BHMG1C9JSJ3 638 aaPredicted RBP10.77□□□□□ -0.69
CCDC47-203ENST00000580986 I6L893 689 aaPredicted RBP10.77□□□□□ -0.69
CCDC47-203ENST00000580986 ARNTLO00327 626 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 BUB1O43683 1085 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 HOXC13P31276 330 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 L1CAMP32004 1257 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 VIPR2P41587 438 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 ATXN1P54253 815 aaKnown RBP10.77□□□□□ -0.69
CCDC47-203ENST00000580986 SEMA3BQ13214 749 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 FAM133BQ5BKY9 247 aaKnown RBP10.77□□□□□ -0.69
CCDC47-203ENST00000580986 EFHC2Q5JST6 749 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 MANEALQ5VSG8 457 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 DENND1CQ8IV53 801 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 RHOT1Q8IXI2 618 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 ZNF557Q8N988 423 aaPredicted RBP10.77□□□□□ -0.69
CCDC47-203ENST00000580986 ATRIPQ8WXE1 791 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 DNASE1L2Q92874 299 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 ATP2A3Q93084 1043 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 RNF34Q969K3 372 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 RSPRY1Q96DX4 576 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 MSANTD3Q96H12 275 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 BTBD6Q96KE9 485 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 RPGRIP1Q96KN7 1286 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 LRRC3BQ96PB8 259 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 PRMT1Q99873 361 aaKnown RBP10.77□□□□□ -0.69
CCDC47-203ENST00000580986 TRMT61BQ9BVS5 477 aaKnown RBP10.77□□□□□ -0.69
CCDC47-203ENST00000580986 SMG9Q9H0W8 520 aaKnown RBP10.77□□□□□ -0.69
CCDC47-203ENST00000580986 KCNK12Q9HB15 430 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 LZTFL1Q9NQ48 299 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 MARK1Q9P0L2 795 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 RCOR3Q9P2K3 495 aaPredicted RBP10.77□□□□□ -0.69
CCDC47-203ENST00000580986 FZD10Q9ULW2 581 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 GUCA1BQ9UMX6 200 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.77□□□□□ -0.69
CCDC47-203ENST00000580986 CAPN6Q9Y6Q1 641 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 COL4A2P08572 1712 aa10.77□□□□□ -0.69
CCDC47-203ENST00000580986 SPOPO43791 374 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 PAGE1O75459 146 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 PALMO75781 387 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 MOCS3O95396 460 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 NFATC1O95644 943 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 IRF1P10914 325 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 COMTP21964 271 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 CTNNA2P26232 953 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 IL1R2P27930 398 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 CTNNA1P35221 906 aaKnown RBP10.76□□□□□ -0.69
CCDC47-203ENST00000580986 IFNAR2P48551 515 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 HCAR3P49019 387 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 NAP1L1P55209 391 aaKnown RBP10.76□□□□□ -0.69
CCDC47-203ENST00000580986 EML3Q32P44 896 aa10.76□□□□□ -0.69
CCDC47-203ENST00000580986 MS4A13Q5J8X5 152 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms