RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 PPP1R21Q6ZMI0 780 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 FAM47EQ6ZV65 393 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 INTS8Q75QN2 995 aaKnown RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 LPCAT2Q7L5N7 544 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 AMIGO2Q86SJ2 522 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 PEG10Q86TG7 708 aaKnown RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 RHOT1Q8IXI2 618 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 CCDC170Q8IYT3 715 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 CPA6Q8N4T0 437 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 ESX1Q8N693 406 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 NAT8LQ8N9F0 302 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 SPERTQ8NA61 448 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 NRG4Q8WWG1 115 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 SHC3Q92529 594 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 C1orf74Q96LT6 269 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 EYA3Q99504 573 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 NUP88Q99567 741 aaPredicted RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 DESI2Q9BSY9 194 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 WACQ9BTA9 647 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 TTLL2Q9BWV7 592 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 TXLNGYQ9BZA5 131 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 PNNQ9H307 717 aaKnown RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 ORC3Q9UBD5 711 aaPredicted RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 C19orf53Q9UNZ5 99 aaPredicted RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 JRKLQ9Y4A0 524 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 MRFAP1Q9Y605 127 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 ZNF521Q96K83 1311 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 A0A0G2JPF8 293 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 CTAGE9A4FU28 777 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 LRRC14BA6NHZ5 514 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 HNRNPCL3B7ZW38 293 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 F5H0A9 414 aaPredicted RBP4.29□□□□□ -1.72
SMG8-205ENST00000580798 H0Y626 953 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 AP3B1O00203 1094 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 CACNB4O00305 520 aaPredicted RBP4.29□□□□□ -1.72
SMG8-205ENST00000580798 CETN3O15182 167 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 THAP12O43422 761 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 BAG4O95429 457 aaKnown RBP4.29□□□□□ -1.72
SMG8-205ENST00000580798 NTN1O95631 604 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 TBX18O95935 607 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 OPN1MWP04001 364 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 HNRNPCL4P0DMR1 293 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 OPN1MW2P0DN77 364 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 OPN1MW3P0DN78 364 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 GZMAP12544 262 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 PBLDP30039 288 aaPredicted RBP4.29□□□□□ -1.72
SMG8-205ENST00000580798 ALDH1B1P30837 517 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 S100A5P33763 92 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 IFNAR2P48551 515 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 ETV1P50549 477 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 CTXN1P60606 82 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 IL1RL1Q01638 556 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 TARDBPQ13148 414 aaKnown RBP eCLIP4.29□□□□□ -1.72
SMG8-205ENST00000580798 CUL4BQ13620 913 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 PRKG1Q13976 671 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 PLS1Q14651 629 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 POSTNQ15063 836 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 PPA1Q15181 289 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 ETFDHQ16134 617 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 ATP2B3Q16720 1220 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 WSCD2Q2TBF2 565 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 KRT71Q3SY84 523 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 MMEL1Q495T6 779 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 IFIT1BQ5T764 474 aaKnown RBP4.29□□□□□ -1.72
SMG8-205ENST00000580798 FAM205BPQ63HN1 556 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 OLFM4Q6UX06 510 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 ZNF517Q6ZMY9 492 aaPredicted RBP4.29□□□□□ -1.72
SMG8-205ENST00000580798 DNAJB7Q7Z6W7 309 aaPredicted RBP4.29□□□□□ -1.72
SMG8-205ENST00000580798 TMEM110Q86TL2 294 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 CCDC13Q8IYE1 715 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 CBARPQ8N350 705 aaPredicted RBP4.29□□□□□ -1.72
SMG8-205ENST00000580798 CAMKK1Q8N5S9 505 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 PPM1NQ8N819 430 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 USP38Q8NB14 1042 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 AVL9Q8NBF6 648 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 DENND6BQ8NEG7 585 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 NLGN4YQ8NFZ3 816 aaPredicted RBP4.29□□□□□ -1.72
SMG8-205ENST00000580798 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.29□□□□□ -1.72
SMG8-205ENST00000580798 ACMSDQ8TDX5 336 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 OTUD7AQ8TE49 926 aaPredicted RBP4.29□□□□□ -1.72
SMG8-205ENST00000580798 ADAMTS18Q8TE60 1221 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 TFAP2BQ92481 460 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 LPIN2Q92539 896 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 HSPH1Q92598 858 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 RGMAQ96B86 450 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 HSPBAP1Q96EW2 488 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 FBXL20Q96IG2 436 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 TMX3Q96JJ7 454 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 CNDP1Q96KN2 507 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 RUNDC3BQ96NL0 473 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 TUBA1CQ9BQE3 449 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 SIL1Q9H173 461 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 C2orf40Q9H1Z8 148 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 JMJD4Q9H9V9 463 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 WASH6PQ9NQA3 447 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 ANLNQ9NQW6 1124 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 CTTNBP2NLQ9P2B4 639 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 TBC1D14Q9P2M4 693 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 AASSQ9UDR5 926 aa4.29□□□□□ -1.72
SMG8-205ENST00000580798 GRID1Q9ULK0 1009 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms