RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 PCDHB18PQ96TA0 734 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 TTYH3Q9C0H2 523 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 WDCPQ9H6R7 721 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 CAPN11Q9UMQ6 739 aa17.03■□□□□ 0.32
IFT20-210ENST00000580357 LUC7L2Q9Y383 392 aaKnown RBP17.03■□□□□ 0.32
IFT20-210ENST00000580357 GOLGA8SH3BPF8 625 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 LILRB5O75023 590 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 ALDH1A2O94788 518 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 KRT3P12035 628 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 GZMAP12544 262 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 HNRNPLP14866 589 aaKnown RBP eCLIP17.02■□□□□ 0.32
IFT20-210ENST00000580357 DGKEP52429 567 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 DEUP1Q05D60 604 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 NME3Q13232 169 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 EIF4HQ15056 248 aaKnown RBP17.02■□□□□ 0.32
IFT20-210ENST00000580357 FAM133BQ5BKY9 247 aaKnown RBP17.02■□□□□ 0.32
IFT20-210ENST00000580357 MS4A13Q5J8X5 152 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 TSSK4Q6SA08 328 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 WDR5BQ86VZ2 330 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 ZNF513Q8N8E2 541 aaPredicted RBP17.02■□□□□ 0.32
IFT20-210ENST00000580357 IL17RCQ8NAC3 791 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 HJURPQ8NCD3 748 aaPredicted RBP17.02■□□□□ 0.32
IFT20-210ENST00000580357 WFIKKN2Q8TEU8 576 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 NKD2Q969F2 451 aaPredicted RBP17.02■□□□□ 0.32
IFT20-210ENST00000580357 POLMQ9NP87 494 aaPredicted RBP17.02■□□□□ 0.32
IFT20-210ENST00000580357 FAM86C1Q9NVL1 165 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 EBF1Q9UH73 591 aa17.02■□□□□ 0.32
IFT20-210ENST00000580357 ITIH6Q6UXX5 1313 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 SYNJ2BP-COX16A0A087WUM0 186 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 GOLGA6L7A0A1B0GV03 622 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 ANKRD62A6NC57 917 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 SIGLEC16A6NMB1 481 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 ZBTB24O43167 697 aaPredicted RBP17.01■□□□□ 0.31
IFT20-210ENST00000580357 TBL1XO60907 577 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 KLF8O95600 359 aaPredicted RBP17.01■□□□□ 0.31
IFT20-210ENST00000580357 APBB3O95704 486 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 MOCS2O96007 188 aaPredicted RBP17.01■□□□□ 0.31
IFT20-210ENST00000580357 DESP17661 470 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 HOXD9P28356 352 aaPredicted RBP17.01■□□□□ 0.31
IFT20-210ENST00000580357 NTSR1P30989 418 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 CXCR3P49682 368 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 SULT1E1P49888 294 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 OXCT1P55809 520 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 MESP2Q0VG99 397 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 PTP4A2Q12974 167 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 TRIM14Q14142 442 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 CRY1Q16526 586 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 RABGAP1LQ5R372 815 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 EMC10Q5UCC4 262 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 TTC39BQ5VTQ0 682 aaPredicted RBP17.01■□□□□ 0.31
IFT20-210ENST00000580357 RNF43Q68DV7 783 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 NADSYN1Q6IA69 706 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 PKN3Q6P5Z2 889 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 RFWD3Q6PCD5 774 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 ANKS1BQ7Z6G8 1248 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 VPS36Q86VN1 386 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 FIBINQ8TAL6 211 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 PPP1R9BQ96SB3 815 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 C11orf70Q9BRQ4 267 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 SELENOOQ9BVL4 669 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 XPO4Q9C0E2 1151 aaKnown RBP17.01■□□□□ 0.31
IFT20-210ENST00000580357 HAUS4Q9H6D7 363 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 COX16Q9P0S2 106 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 CACNA1HO95180 2353 aa17.01■□□□□ 0.31
IFT20-210ENST00000580357 PRRT4C9JH25 899 aa17■□□□□ 0.31
IFT20-210ENST00000580357 F5H5T6 163 aa17■□□□□ 0.31
IFT20-210ENST00000580357 TRIM24O15164 1050 aa17■□□□□ 0.31
IFT20-210ENST00000580357 ENDOD1O94919 500 aa17■□□□□ 0.31
IFT20-210ENST00000580357 PDGFRAP16234 1089 aa17■□□□□ 0.31
IFT20-210ENST00000580357 TACR2P21452 398 aa17■□□□□ 0.31
IFT20-210ENST00000580357 SLC6A4P31645 630 aa17■□□□□ 0.31
IFT20-210ENST00000580357 PITX1P78337 314 aaPredicted RBP17■□□□□ 0.31
IFT20-210ENST00000580357 FOXK2Q01167 660 aa17■□□□□ 0.31
IFT20-210ENST00000580357 C2CD6Q53TS8 623 aa17■□□□□ 0.31
IFT20-210ENST00000580357 KIAA0907Q7Z7F0 614 aaPredicted RBP17■□□□□ 0.31
IFT20-210ENST00000580357 MCOLN2Q8IZK6 566 aa17■□□□□ 0.31
IFT20-210ENST00000580357 LGI2Q8N0V4 545 aa17■□□□□ 0.31
IFT20-210ENST00000580357 CCDC33Q8N5R6 958 aa17■□□□□ 0.31
IFT20-210ENST00000580357 ALLCQ8N6M5 410 aa17■□□□□ 0.31
IFT20-210ENST00000580357 TXNDC5Q8NBS9 432 aaKnown RBP17■□□□□ 0.31
IFT20-210ENST00000580357 C3orf20Q8ND61 904 aa17■□□□□ 0.31
IFT20-210ENST00000580357 C1orf74Q96LT6 269 aa17■□□□□ 0.31
IFT20-210ENST00000580357 SYT11Q9BT88 431 aa17■□□□□ 0.31
IFT20-210ENST00000580357 ELOVL2Q9NXB9 296 aa17■□□□□ 0.31
IFT20-210ENST00000580357 ARHGEF38Q9NXL2 777 aa17■□□□□ 0.31
IFT20-210ENST00000580357 LMNAP02545 664 aaKnown RBP16.99■□□□□ 0.31
IFT20-210ENST00000580357 ATP5BP06576 529 aaKnown RBP16.99■□□□□ 0.31
IFT20-210ENST00000580357 TPM1P09493 284 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 SDC4P31431 198 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 FLT3P36888 993 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 SLC12A1Q13621 1099 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 RAP1GAP2Q684P5 730 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 SPECC1LQ69YQ0 1117 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 MON1BQ7L1V2 547 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 CHSY1Q86X52 802 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 DRC7Q8IY82 874 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 AHI1Q8N157 1196 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.99■□□□□ 0.31
IFT20-210ENST00000580357 TSTD1Q8NFU3 115 aa16.99■□□□□ 0.31
IFT20-210ENST00000580357 CPLX3Q8WVH0 158 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms