RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 VWA3BQ502W6 1294 aa20.32■□□□□ 0.84
LIMD2-209ENST00000580222 TPGS1Q6ZTW0 290 aa20.32■□□□□ 0.84
LIMD2-209ENST00000580222 NUDT18Q6ZVK8 323 aa20.32■□□□□ 0.84
LIMD2-209ENST00000580222 NUP93Q8N1F7 819 aa20.32■□□□□ 0.84
LIMD2-209ENST00000580222 CCDC150Q8NCX0 1101 aa20.32■□□□□ 0.84
LIMD2-209ENST00000580222 MMS19Q96T76 1030 aa20.32■□□□□ 0.84
LIMD2-209ENST00000580222 BBS2Q9BXC9 721 aa20.32■□□□□ 0.84
LIMD2-209ENST00000580222 VPS16Q9H269 839 aa20.32■□□□□ 0.84
LIMD2-209ENST00000580222 NDST4Q9H3R1 872 aa20.32■□□□□ 0.84
LIMD2-209ENST00000580222 MYO18BQ8IUG5 2567 aa20.31■□□□□ 0.84
LIMD2-209ENST00000580222 P4HA2O15460 535 aa20.31■□□□□ 0.84
LIMD2-209ENST00000580222 TNFSF14O43557 240 aa20.31■□□□□ 0.84
LIMD2-209ENST00000580222 ATICP31939 592 aa20.31■□□□□ 0.84
LIMD2-209ENST00000580222 KCNT1Q5JUK3 1230 aa20.31■□□□□ 0.84
LIMD2-209ENST00000580222 MIIPQ5JXC2 388 aa20.31■□□□□ 0.84
LIMD2-209ENST00000580222 SNX30Q5VWJ9 437 aa20.31■□□□□ 0.84
LIMD2-209ENST00000580222 LAYNQ6UX15 382 aa20.31■□□□□ 0.84
LIMD2-209ENST00000580222 BHMTQ93088 406 aa20.31■□□□□ 0.84
LIMD2-209ENST00000580222 RAB20Q9NX57 234 aa20.31■□□□□ 0.84
LIMD2-209ENST00000580222 IL37Q9NZH6 218 aa20.31■□□□□ 0.84
LIMD2-209ENST00000580222 PTPRQQ9UMZ3 2332 aa20.31■□□□□ 0.84
LIMD2-209ENST00000580222 GFRA2O00451 464 aa20.3■□□□□ 0.84
LIMD2-209ENST00000580222 ZDHHC11BP0C7U3 371 aa20.3■□□□□ 0.84
LIMD2-209ENST00000580222 IL27RAQ6UWB1 636 aa20.3■□□□□ 0.84
LIMD2-209ENST00000580222 PAQR9Q6ZVX9 377 aa20.3■□□□□ 0.84
LIMD2-209ENST00000580222 HTR3DQ70Z44 454 aa20.3■□□□□ 0.84
LIMD2-209ENST00000580222 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.3■□□□□ 0.84
LIMD2-209ENST00000580222 PLK2Q9NYY3 685 aa20.3■□□□□ 0.84
LIMD2-209ENST00000580222 SHROOM3Q8TF72 1996 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 PMM2O15305 246 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 STAU1O95793 577 aaKnown RBP20.29■□□□□ 0.84
LIMD2-209ENST00000580222 SERPINC1P01008 464 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 HLA-EP13747 358 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 IL12RB1P42701 662 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 TNNC1P63316 161 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 SEMG2Q02383 582 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 SGSM1Q2NKQ1 1148 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 ZNF667Q5HYK9 610 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 FKBP15Q5T1M5 1219 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 GAS2L3Q86XJ1 694 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 PDZD8Q8NEN9 1154 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 OR6B3Q8NGW1 331 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 OVCA2Q8WZ82 227 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 TAF4BQ92750 862 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 FCRL3Q96P31 734 aaPredicted RBP20.29■□□□□ 0.84
LIMD2-209ENST00000580222 KLF16Q9BXK1 252 aaPredicted RBP20.29■□□□□ 0.84
LIMD2-209ENST00000580222 ELOVL4Q9GZR5 314 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 XYLT2Q9H1B5 865 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 SNX25Q9H3E2 840 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 MARK1Q9P0L2 795 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 COQ4Q9Y3A0 265 aa20.29■□□□□ 0.84
LIMD2-209ENST00000580222 ASS1P00966 412 aaKnown RBP20.28■□□□□ 0.84
LIMD2-209ENST00000580222 DGKGP49619 791 aa20.28■□□□□ 0.84
LIMD2-209ENST00000580222 FILIP1LQ4L180 1135 aa20.28■□□□□ 0.84
LIMD2-209ENST00000580222 GBP6Q6ZN66 633 aa20.28■□□□□ 0.84
LIMD2-209ENST00000580222 CACUL1Q86Y37 369 aa20.28■□□□□ 0.84
LIMD2-209ENST00000580222 TMPRSS6Q8IU80 811 aa20.28■□□□□ 0.84
LIMD2-209ENST00000580222 SEMA4DQ92854 862 aa20.28■□□□□ 0.84
LIMD2-209ENST00000580222 ELMO3Q96BJ8 720 aa20.28■□□□□ 0.84
LIMD2-209ENST00000580222 XPO6Q96QU8 1125 aaKnown RBP20.28■□□□□ 0.84
LIMD2-209ENST00000580222 RBSNQ9H1K0 784 aa20.28■□□□□ 0.84
LIMD2-209ENST00000580222 NXF1Q9UBU9 619 aaKnown RBP20.28■□□□□ 0.84
LIMD2-209ENST00000580222 FBXO10Q9UK96 956 aa20.28■□□□□ 0.84
LIMD2-209ENST00000580222 LGALS16A8MUM7 142 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 H0Y8X5 98 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 PYCARD-AS1I3L0S3 204 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 J3QKU1 62 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 CBX4O00257 560 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 TACC1O75410 805 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 RTN3O95197 1032 aaPredicted RBP20.27■□□□□ 0.84
LIMD2-209ENST00000580222 IGLV3-19P01714 112 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 P4HA1P13674 534 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 TUBP50607 506 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 COPAP53621 1224 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 SLC5A3P53794 718 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 FANCCQ00597 558 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 IL9RQ01113 521 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 ENPP2Q13822 863 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 WDR72Q3MJ13 1102 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 SPOPLQ6IQ16 392 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 SCARA5Q6ZMJ2 495 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 FAM124AQ86V42 546 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 LSM14AQ8ND56 463 aaKnown RBP20.27■□□□□ 0.84
LIMD2-209ENST00000580222 SIPA1Q96FS4 1042 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 CRACR2AQ9BSW2 395 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 INTS2Q9H0H0 1204 aaKnown RBP20.27■□□□□ 0.84
LIMD2-209ENST00000580222 C6orf106Q9H6K1 298 aaPredicted RBP20.27■□□□□ 0.84
LIMD2-209ENST00000580222 VRTNQ9H8Y1 702 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 WDR35Q9P2L0 1181 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 ANKRD6Q9Y2G4 727 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 CABIN1Q9Y6J0 2220 aa20.27■□□□□ 0.84
LIMD2-209ENST00000580222 FAM92AA1XBS5 289 aa20.26■□□□□ 0.83
LIMD2-209ENST00000580222 GTPBP10A4D1E9 387 aaKnown RBP20.26■□□□□ 0.83
LIMD2-209ENST00000580222 ACO1P21399 889 aaKnown RBP20.26■□□□□ 0.83
LIMD2-209ENST00000580222 LRMPQ12912 555 aa20.26■□□□□ 0.83
LIMD2-209ENST00000580222 SUZ12Q15022 739 aaKnown RBP20.26■□□□□ 0.83
LIMD2-209ENST00000580222 EXOC3L4Q17RC7 722 aa20.26■□□□□ 0.83
LIMD2-209ENST00000580222 GEN1Q17RS7 908 aa20.26■□□□□ 0.83
LIMD2-209ENST00000580222 APTXQ7Z2E3 356 aaKnown RBP20.26■□□□□ 0.83
LIMD2-209ENST00000580222 TMPRSS12Q86WS5 348 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms