RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 MIR1-1HGQ9H1L0 117 aa11.12□□□□□ -0.63
CSNK1D-210ENST00000579308 GAREM1Q9H706 876 aa11.12□□□□□ -0.63
CSNK1D-210ENST00000579308 OSGEPQ9NPF4 335 aa11.12□□□□□ -0.63
CSNK1D-210ENST00000579308 OLA1Q9NTK5 396 aaKnown RBP11.12□□□□□ -0.63
CSNK1D-210ENST00000579308 TOR4AQ9NXH8 423 aa11.12□□□□□ -0.63
CSNK1D-210ENST00000579308 SFMBT1Q9UHJ3 866 aa11.12□□□□□ -0.63
CSNK1D-210ENST00000579308 EIF2B4Q9UI10 523 aaKnown RBP11.12□□□□□ -0.63
CSNK1D-210ENST00000579308 TSPAN16Q9UKR8 245 aa11.12□□□□□ -0.63
CSNK1D-210ENST00000579308 PLA2G4CQ9UP65 541 aa11.12□□□□□ -0.63
CSNK1D-210ENST00000579308 FNDC3AQ9Y2H6 1198 aaKnown RBP11.12□□□□□ -0.63
CSNK1D-210ENST00000579308 O00370 1275 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 TSPAN3O60637 253 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 CER1O95813 267 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 IGLV3-27P01718 113 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 EPB41P11171 864 aaKnown RBP11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 ACADMP11310 421 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 ACSL1P33121 698 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 MATKP42679 507 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 CSNK1EP49674 416 aaKnown RBP11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 SGSHP51688 502 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 ZNF445P59923 1031 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 BST2Q10589 180 aaKnown RBP11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 COBLL1Q53SF7 1204 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 MPP7Q5T2T1 576 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 UBA3Q8TBC4 463 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 WFIKKN2Q8TEU8 576 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 CYB5D2Q8WUJ1 264 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 EDEM1Q92611 657 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 ORAI3Q9BRQ5 295 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 C6orf106Q9H6K1 298 aaPredicted RBP11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 LRRC4Q9HBW1 653 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 PRSS16Q9NQE7 514 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 TM7SF3Q9NS93 570 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 KIAA1257Q9ULG3 409 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 LHX6Q9UPM6 363 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 APOBEC2Q9Y235 224 aaKnown RBP11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 GPSM3Q9Y4H4 160 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 BAHCC1Q9P281 2608 aa11.11□□□□□ -0.63
CSNK1D-210ENST00000579308 A0A1B0GVT2 93 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 SLC16A3O15427 465 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 DLDP09622 509 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 VDRP11473 427 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 PRCPP42785 496 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 AFF3P51826 1226 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 PMS1P54277 932 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 DAOAP59103 153 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 RPS14P62263 151 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 ZBTB16Q05516 673 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 ADIGQ0VDE8 80 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 COL9A2Q14055 689 aaPredicted RBP11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 KIF19Q2TAC6 998 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 SGO2Q562F6 1265 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 PIK3R6Q5UE93 754 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 ANKRD40Q6AI12 368 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 PMF1Q6P1K2 205 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 MSANTD2Q6P1R3 559 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 LCLAT1Q6UWP7 414 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 CHST9Q7L1S5 443 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 TMPRSS7Q7RTY8 843 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 FAM124AQ86V42 546 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 SETD7Q8WTS6 366 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 RNF139Q8WU17 664 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 SLC35F5Q8WV83 523 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 TFAP2BQ92481 460 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 SLC35C1Q96A29 364 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 AZIN2Q96A70 460 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 IPO9Q96P70 1041 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 ZSWIM1Q9BR11 485 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 IRX2Q9BZI1 471 aaPredicted RBP11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 SCAND2PQ9GZW5 306 aaPredicted RBP11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 LHX5Q9H2C1 402 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 FBRSQ9HAH7 460 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 CNGB3Q9NQW8 809 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 ABCC13Q9NSE7 274 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 ABCB8Q9NUT2 735 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 GGA2Q9UJY4 613 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 KNL1Q8NG31 2342 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 FASNP49327 2511 aaKnown RBP11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 LOC400499M0QZD8 3231 aa11.1□□□□□ -0.63
CSNK1D-210ENST00000579308 ADAMTS9Q9P2N4 1935 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 GOLGA6L7A0A1B0GV03 622 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 C10orf142B7Z368 130 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 RNF225M0QZC1 329 aaPredicted RBP11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 PMM2O15305 246 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 MSI1O43347 362 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 ATXN1LP0C7T5 689 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 SETSIPP0DME0 302 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 PABPC1P11940 636 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 CD70P32970 193 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 FKBP3Q00688 224 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 ARID5AQ03989 594 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 CNGA2Q16280 664 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 FNDC3BQ53EP0 1204 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 FAM133BQ5BKY9 247 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 KCNT1Q5JUK3 1230 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 MBLAC2Q68D91 279 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 CACUL1Q86Y37 369 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 AHI1Q8N157 1196 aa11.09□□□□□ -0.63
CSNK1D-210ENST00000579308 ZNF366Q8N895 744 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms