RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 HJURPQ8NCD3 748 aaPredicted RBP6.8□□□□□ -1.32
TRAF4-213ENST00000578917 SLC30A5Q8TAD4 765 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 EPS8L1Q8TE68 723 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 CPLX3Q8WVH0 158 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 AZIN2Q96A70 460 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 NAP1L5Q96NT1 182 aaPredicted RBP6.8□□□□□ -1.32
TRAF4-213ENST00000578917 AGPAT1Q99943 283 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 TPSD1Q9BZJ3 242 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 GANQ9H2C0 597 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 WDCPQ9H6R7 721 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 CBX8Q9HC52 389 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 ABCB8Q9NUT2 735 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 ASNSD1Q9NWL6 643 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 ELOVL2Q9NXB9 296 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 CACNA2D2Q9NY47 1150 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 RRN3Q9NYV6 651 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 ADAM22Q9P0K1 906 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 SMG5Q9UPR3 1016 aaKnown RBP6.8□□□□□ -1.32
TRAF4-213ENST00000578917 COL4A3Q01955 1670 aa6.8□□□□□ -1.32
TRAF4-213ENST00000578917 CCDC163A0A0D9SF12 145 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 ANTXRLA6NF34 631 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 NPC1O15118 1278 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 LILRB5O75023 590 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 DAB1O75553 588 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 RHOBTB1O94844 696 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 IGLV3-27P01718 113 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 CALB1P05937 261 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 KRT3P12035 628 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 TDGF1P13385 188 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 PDGFRAP16234 1089 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 HOXC13P31276 330 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 GABRB2P47870 512 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 JAM2P57087 298 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 ST8SIA6P61647 398 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 ATP11AP98196 1134 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 NNTQ13423 1086 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 IQCB1Q15051 598 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 ASIC2Q16515 512 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 GEN1Q17RS7 908 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 TSR1Q2NL82 804 aaKnown RBP6.79□□□□□ -1.32
TRAF4-213ENST00000578917 SLC25A52Q3SY17 297 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 FNDC3BQ53EP0 1204 aaKnown RBP6.79□□□□□ -1.32
TRAF4-213ENST00000578917 MPP7Q5T2T1 576 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 PIK3R6Q5UE93 754 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 SFMBT2Q5VUG0 894 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 RNF219Q5W0B1 726 aaPredicted RBP6.79□□□□□ -1.32
TRAF4-213ENST00000578917 EGFLAMQ63HQ2 1017 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 LAIR1Q6GTX8 287 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 OLFML1Q6UWY5 402 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 SERPINA13PQ6UXR4 307 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 TMEM92Q6UXU6 159 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 CHST9Q7L1S5 443 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 XYLT1Q86Y38 959 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 DCLK2Q8N568 766 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 GPR161Q8N6U8 529 aaKnown RBP6.79□□□□□ -1.32
TRAF4-213ENST00000578917 GAB3Q8WWW8 586 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 DDX1Q92499 740 aaKnown RBP6.79□□□□□ -1.32
TRAF4-213ENST00000578917 NELL1Q92832 810 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 SLC39A13Q96H72 371 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 PIWIL1Q96J94 861 aaKnown RBP6.79□□□□□ -1.32
TRAF4-213ENST00000578917 SPACA7Q96KW9 195 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 FCRL2Q96LA5 508 aaPredicted RBP6.79□□□□□ -1.32
TRAF4-213ENST00000578917 RPRD1AQ96P16 312 aaPredicted RBP6.79□□□□□ -1.32
TRAF4-213ENST00000578917 SLC2A13Q96QE2 648 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 PPP1R9BQ96SB3 815 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 ACOX2Q99424 681 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 IRX2Q9BZI1 471 aaPredicted RBP6.79□□□□□ -1.32
TRAF4-213ENST00000578917 HSD3B7Q9H2F3 369 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 EPC1Q9H2F5 836 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 TSPY26PQ9H489 355 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 TMEM51Q9NW97 253 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 EBF1Q9UH73 591 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 GGA2Q9UJY4 613 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 STOML2Q9UJZ1 356 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 NOCTQ9UK39 431 aaKnown RBP6.79□□□□□ -1.32
TRAF4-213ENST00000578917 USP18Q9UMW8 372 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 SLC27A6Q9Y2P4 619 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 STARD13Q9Y3M8 1113 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 STON1Q9Y6Q2 735 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 SPTBN4Q9H254 2564 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 FAM186AA6NE01 2351 aa6.79□□□□□ -1.32
TRAF4-213ENST00000578917 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 A0A1B0GTH6 734 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 A0A1W2PQC6 194 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 LRRC53A6NM62 1247 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 TMCO5BA8MYB1 307 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 WASH3PC4AMC7 463 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 GFRA2O00451 464 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 DCLK1O15075 740 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 CBFA2T2O43439 604 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 SRGAP2O75044 1071 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 ADAM23O75077 832 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 PAGE1O75459 146 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 EPHX1P07099 455 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 RETP07949 1114 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 ACADMP11310 421 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 PABPC1P11940 636 aaKnown RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 CHRNB2P17787 502 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 TACR2P21452 398 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 MMP8P22894 467 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms