RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 TCF3P15923 654 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 ZNF569Q5MCW4 686 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 PIK3R6Q5UE93 754 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 TRIM68Q6AZZ1 485 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 NADSYN1Q6IA69 706 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 RFWD3Q6PCD5 774 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 Q6ZNB5 142 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 CYP4V2Q6ZWL3 525 aaPredicted RBP12.57□□□□□ -0.4
IFT20-207ENST00000578547 HTR3DQ70Z44 454 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 MFSD6LQ8IWD5 586 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 RHOT1Q8IXI2 618 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 PYROXD2Q8N2H3 581 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 TRIM58Q8NG06 486 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 NTAN1Q96AB6 310 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 E2F7Q96AV8 911 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 MAGEB5Q9BZ81 275 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.57□□□□□ -0.4
IFT20-207ENST00000578547 TMEM51Q9NW97 253 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 THG1LQ9NWX6 298 aaKnown RBP12.57□□□□□ -0.4
IFT20-207ENST00000578547 DUS2Q9NX74 493 aaKnown RBP12.57□□□□□ -0.4
IFT20-207ENST00000578547 OBP2AQ9NY56 170 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 FZD10Q9ULW2 581 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 HS3ST4Q9Y661 456 aa12.57□□□□□ -0.4
IFT20-207ENST00000578547 SLC9A3R1O14745 358 aaPredicted RBP12.56□□□□□ -0.4
IFT20-207ENST00000578547 TSPAN3O60637 253 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 KRT1P04264 644 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 KRT7P08729 469 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 RARAP10276 462 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 PSMC3P17980 439 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 TACR2P21452 398 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 GDI1P31150 447 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 SLC6A4P31645 630 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 MARCKSL1P49006 195 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 AIF1P55008 147 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 SCAPQ12770 1279 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 KRT81Q14533 505 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 CA9Q16790 459 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 ATP13A4Q4VNC1 1196 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 ODF2Q5BJF6 829 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 FAM133BQ5BKY9 247 aaKnown RBP12.56□□□□□ -0.4
IFT20-207ENST00000578547 PPP6R3Q5H9R7 873 aaPredicted RBP12.56□□□□□ -0.4
IFT20-207ENST00000578547 MS4A13Q5J8X5 152 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 ADGRF1Q5T601 910 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 ERMARDQ5T6L9 678 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 NT5DC3Q86UY8 548 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 LGI2Q8N0V4 545 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 GJD3Q8N144 294 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 SLC44A3Q8N4M1 653 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 DEPDC1BQ8WUY9 529 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 KRT35Q92764 455 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 BHMTQ93088 406 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 NXPE3Q969Y0 559 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 ASIC4Q96FT7 647 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 DDX50Q9BQ39 737 aaKnown RBP12.56□□□□□ -0.4
IFT20-207ENST00000578547 LINC00597Q9H2U6 94 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 IGSF9Q9P2J2 1179 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 TBC1D14Q9P2M4 693 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 AMFRQ9UKV5 643 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 VANGL2Q9ULK5 521 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 ZNF510Q9Y2H8 683 aa12.56□□□□□ -0.4
IFT20-207ENST00000578547 F5H5T6 163 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 PI4K2BG5E9Z4 385 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 PSTPIP1O43586 416 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 CREB3O43889 395 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 SRGAP2O75044 1071 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 LATS1O95835 1130 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 ARSAP15289 507 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 GNG11P61952 73 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 MTA1Q13330 715 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 AUHQ13825 339 aaKnown RBP12.55□□□□□ -0.4
IFT20-207ENST00000578547 BOLA3Q53S33 107 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 TPGS1Q6ZTW0 290 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 C14orf80Q86SX3 495 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 CIR1Q86X95 450 aaPredicted RBP12.55□□□□□ -0.4
IFT20-207ENST00000578547 RNF135Q8IUD6 432 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 SLC35F6Q8N357 371 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 TTC8Q8TAM2 541 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 OSCP1Q8WVF1 389 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 TEKT4Q8WW24 435 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 PRICKLE1Q96MT3 831 aaPredicted RBP12.55□□□□□ -0.4
IFT20-207ENST00000578547 RPRD1AQ96P16 312 aaPredicted RBP12.55□□□□□ -0.4
IFT20-207ENST00000578547 HAPLN3Q96S86 360 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 KCTD15Q96SI1 283 aaPredicted RBP12.55□□□□□ -0.4
IFT20-207ENST00000578547 TRMT61BQ9BVS5 477 aaKnown RBP12.55□□□□□ -0.4
IFT20-207ENST00000578547 EBF3Q9H4W6 596 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 KCND1Q9NSA2 647 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 OR12D3Q9UGF7 316 aa12.55□□□□□ -0.4
IFT20-207ENST00000578547 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.55□□□□□ -0.4
IFT20-207ENST00000578547 MYO10Q9HD67 2058 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 LRRD1A4D1F6 860 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 E9PAM4 449 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 FAM72CH0Y354 149 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 MSNP26038 577 aaKnown RBP12.54□□□□□ -0.4
IFT20-207ENST00000578547 CTNNA1P35221 906 aaKnown RBP12.54□□□□□ -0.4
IFT20-207ENST00000578547 CHKAP35790 457 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 SGSHP51688 502 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 CDH6P55285 790 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 TNK2Q07912 1038 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 FCHO2Q0JRZ9 810 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 PDGFRLQ15198 375 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms