RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 EPS8L3Q8TE67 593 aaKnown RBP11.48□□□□□ -0.57
SKA2-204ENST00000578519 DQX1Q8TE96 717 aaKnown RBP11.48□□□□□ -0.57
SKA2-204ENST00000578519 ALKBH8Q96BT7 664 aaKnown RBP11.48□□□□□ -0.57
SKA2-204ENST00000578519 CASD1Q96PB1 797 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 TKTL2Q9H0I9 626 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 RAB6CQ9H0N0 254 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 LRRC4CQ9HCJ2 640 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 WDR6Q9NNW5 1121 aaKnown RBP11.48□□□□□ -0.57
SKA2-204ENST00000578519 KCNK9Q9NPC2 374 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 STK39Q9UEW8 545 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 OR12D3Q9UGF7 316 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 SMG5Q9UPR3 1016 aaKnown RBP11.48□□□□□ -0.57
SKA2-204ENST00000578519 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.48□□□□□ -0.57
SKA2-204ENST00000578519 CLUHO75153 1309 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 ERICH4A6NGS2 130 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 TBKBP1A7MCY6 615 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 POC1B-GALNT4F8VUJ3 575 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 GOLGA8MH3BSY2 632 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 DCLK1O15075 740 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 CPP00450 1065 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 APOEP02649 317 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 FYNP06241 537 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 CPB1P15086 417 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 KRT15P19012 456 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 YWHAQP27348 245 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 TUFMP49411 452 aaKnown RBP11.47□□□□□ -0.57
SKA2-204ENST00000578519 SLC18A1P54219 525 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 GBE1Q04446 702 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 GPR17Q13304 367 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 SEMA5AQ13591 1074 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 DPYSQ14117 519 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 SEPT7Q16181 437 aaKnown RBP11.47□□□□□ -0.57
SKA2-204ENST00000578519 ANKRD20A2Q5SQ80 823 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 ANKRD20A1Q5TYW2 823 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 ANKRD20A3Q5VUR7 823 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 CNKSR3Q6P9H4 555 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 GPRIN1Q7Z2K8 1008 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 ANKLE1Q8NAG6 615 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 EDEM1Q92611 657 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 TBC1D31Q96DN5 1066 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 SGSM3Q96HU1 749 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 SPATA17Q96L03 361 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 OLFM3Q96PB7 478 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 SMC6Q96SB8 1091 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 TTPALQ9BTX7 342 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 SMOC2Q9H3U7 446 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 ACSS3Q9H6R3 686 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 ETNK1Q9HBU6 452 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 TLR8Q9NR97 1041 aaKnown RBP11.47□□□□□ -0.57
SKA2-204ENST00000578519 TMLHEQ9NVH6 421 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 HAUS2Q9NVX0 235 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 ARHGEF38Q9NXL2 777 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 CLIC5Q9NZA1 410 aa11.47□□□□□ -0.57
SKA2-204ENST00000578519 RASA4BC9J798 803 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 TNFRSF10BO14763 440 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 IRAK2O43187 625 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 RASA4O43374 803 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 NEBLO76041 1014 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 FAM107AO95990 144 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 ITGB1P05556 798 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 APRTP07741 180 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 GALTP07902 379 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 SRGAP2BP0DMP2 458 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 BRAFP15056 766 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 IGFBP6P24592 240 aaPredicted RBP11.46□□□□□ -0.57
SKA2-204ENST00000578519 EPHB2P29323 1055 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 IFI35P80217 286 aaPredicted RBP11.46□□□□□ -0.57
SKA2-204ENST00000578519 IL9RQ01113 521 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 GUCY1A3Q02108 690 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 NRG1Q02297 640 aaPredicted RBP11.46□□□□□ -0.57
SKA2-204ENST00000578519 SEMA3BQ13214 749 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 PRKD1Q15139 912 aaPredicted RBP11.46□□□□□ -0.57
SKA2-204ENST00000578519 USP41Q3LFD5 358 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 OTUD1Q5VV17 481 aaPredicted RBP11.46□□□□□ -0.57
SKA2-204ENST00000578519 TIGD7Q6NT04 549 aaPredicted RBP11.46□□□□□ -0.57
SKA2-204ENST00000578519 MSANTD2Q6P1R3 559 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 DENND5BQ6ZUT9 1274 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 CYS1Q717R9 158 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 PID1Q7Z2X4 250 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 CPLX4Q7Z7G2 160 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 TAC4Q86UU9 113 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 EXOC3L1Q86VI1 746 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 ANKMY2Q8IV38 441 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 PYROXD2Q8N2H3 581 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 COLGALT1Q8NBJ5 622 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 ZNF784Q8NCA9 323 aaPredicted RBP11.46□□□□□ -0.57
SKA2-204ENST00000578519 PDZD8Q8NEN9 1154 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 CCDC110Q8TBZ0 833 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 C1orf74Q96LT6 269 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 XPO6Q96QU8 1125 aaKnown RBP11.46□□□□□ -0.57
SKA2-204ENST00000578519 TMEM209Q96SK2 561 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 RETREG1Q9H6L5 497 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 C10orf88Q9H8K7 445 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 SSU72Q9NP77 194 aaKnown RBP11.46□□□□□ -0.57
SKA2-204ENST00000578519 KLHL8Q9P2G9 620 aaPredicted RBP11.46□□□□□ -0.57
SKA2-204ENST00000578519 IGSF9Q9P2J2 1179 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 GGA2Q9UJY4 613 aa11.46□□□□□ -0.57
SKA2-204ENST00000578519 ABHD14A-ACY1A0A1B0GW23 586 aa11.45□□□□□ -0.58
SKA2-204ENST00000578519 MAGEB16A2A368 324 aa11.45□□□□□ -0.58
SKA2-204ENST00000578519 SDR42E2A6NKP2 422 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms