RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 CATSPERBQ9H7T0 1116 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 CAB39LQ9H9S4 337 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 XPNPEP3Q9NQH7 507 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 SAR1AQ9NR31 198 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 FAM53CQ9NYF3 392 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 MROH7Q68CQ1 1323 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 YDJCA8MPS7 323 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 ZSCAN9O15535 394 aaPredicted RBP12.33□□□□□ -0.44
ERBB2-206ENST00000578373 TRUB2O95900 331 aaKnown RBP12.33□□□□□ -0.44
ERBB2-206ENST00000578373 YBX3P16989 372 aaKnown RBP eCLIP12.33□□□□□ -0.44
ERBB2-206ENST00000578373 CCR1P32246 355 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 GBE1Q04446 702 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 PEX6Q13608 980 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 ZNF484Q5JVG2 852 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 SWT1Q5T5J6 900 aaKnown RBP12.33□□□□□ -0.44
ERBB2-206ENST00000578373 TXNRD3NBQ6F5E7 133 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 PTRHD1Q6GMV3 140 aaKnown RBP12.33□□□□□ -0.44
ERBB2-206ENST00000578373 TMC7Q7Z402 723 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 GLIS1Q8NBF1 620 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 PIK3R5Q8WYR1 880 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 ULBP1Q9BZM6 244 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 NMRAL1Q9HBL8 299 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 PNPOQ9NVS9 261 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 ZNF229Q9UJW7 825 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 DRG1Q9Y295 367 aaKnown RBP12.33□□□□□ -0.44
ERBB2-206ENST00000578373 PCDHA2Q9Y5H9 948 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 RGL2O15211 777 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 LRCH4O75427 683 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 THPOP40225 353 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 JAG1P78504 1218 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 LRRC74AQ0VAA2 488 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 C4orf22Q6V702 233 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 ROBO3Q96MS0 1386 aa12.33□□□□□ -0.44
ERBB2-206ENST00000578373 UBDO15205 165 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 MTSS1O43312 755 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 FKBP6O75344 327 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 ALADP13716 330 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 ITGB6P18564 788 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 RPS12P25398 132 aaKnown RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 POU4F1Q01851 419 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 GRIK4Q16099 956 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 ILDR2Q71H61 639 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 TFAP2BQ92481 460 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 ECSITQ9BQ95 431 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 TMEM79Q9BSE2 394 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 DENND2DQ9H6A0 471 aaPredicted RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 APOBEC3GQ9HC16 384 aaKnown RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 LMCD1Q9NZU5 365 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 NID2Q14112 1375 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 UBR1Q8IWV7 1749 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 MAP1BP46821 2468 aaKnown RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 CLDN5O00501 218 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 PAPSS1O43252 624 aaPredicted RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 ATICP31939 592 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 HDAC4P56524 1084 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 SETD3Q86TU7 594 aaPredicted RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 CALML6Q8TD86 181 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 CPT1BQ92523 772 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 GPR63Q9BZJ6 419 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 GRIP2Q9C0E4 1043 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 AFDNP55196 1824 aaKnown RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 CNTNAP2Q9UHC6 1331 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 TRPC5OSA6NMA1 111 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 IRF6O14896 467 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 ITGAVP06756 1048 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 ATP4AP20648 1035 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 ZNF143P52747 638 aaPredicted RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 ACAP1Q15027 740 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 VWA5B1Q5TIE3 1220 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 CRELD2Q6UXH1 353 aaPredicted RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 ERO1BQ86YB8 467 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 DNERQ8NFT8 737 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 OR6Y1Q8NGX8 325 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 URGCPQ8TCY9 931 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 C17orf80Q9BSJ5 609 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 WDR55Q9H6Y2 383 aaPredicted RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 NRDE2Q9H7Z3 1164 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 PDGFCQ9NRA1 345 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 ZDHHC18Q9NUE0 388 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 BTBD7Q9P203 1132 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 CPA4Q9UI42 421 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 COL1A1P02452 1464 aaPredicted RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 SRRM3A6NNA2 597 aaPredicted RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 F7P08709 466 aaPredicted RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 TGFB3P10600 412 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 GDF10P55107 478 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 WDR4P57081 412 aaKnown RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 BNIP1Q12981 228 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 TBCCQ15814 346 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 RNF219Q5W0B1 726 aaPredicted RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 FOXR2Q6PJQ5 311 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 LINC00523Q86TU6 105 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 PIGZQ86VD9 579 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 PPP2R3CQ969Q6 453 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 ACO2Q99798 780 aaKnown RBP12.32□□□□□ -0.44
ERBB2-206ENST00000578373 SYT15Q9BQS2 421 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 UBXN6Q9BZV1 441 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 DMAC2Q9NW81 257 aa12.32□□□□□ -0.44
ERBB2-206ENST00000578373 INPP4BO15327 924 aa12.31□□□□□ -0.44
ERBB2-206ENST00000578373 STX7O15400 261 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms