RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 C6orf118Q5T5N4 469 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 SIX6OS1Q8N1H7 587 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 AGGF1Q8N302 714 aaeCLIP14.26□□□□□ -0.13
RNF43-202ENST00000577625 UTP4Q969X6 686 aaKnown RBP14.26□□□□□ -0.13
RNF43-202ENST00000577625 AZIN2Q96A70 460 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 FAM149B1Q96BN6 582 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 TMEM209Q96SK2 561 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 ELAC1Q9H777 363 aaKnown RBP14.26□□□□□ -0.13
RNF43-202ENST00000577625 ETNK1Q9HBU6 452 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 AAASQ9NRG9 546 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 TMLHEQ9NVH6 421 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 GPATCH2LQ9NWQ4 482 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 GALNT8Q9NY28 637 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.26□□□□□ -0.13
RNF43-202ENST00000577625 SAE1Q9UBE0 346 aaPredicted RBP14.26□□□□□ -0.13
RNF43-202ENST00000577625 DNAJB4Q9UDY4 337 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 ANAPC5Q9UJX4 755 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 MYO16Q9Y6X6 1858 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 COL4A4P53420 1690 aaPredicted RBP14.26□□□□□ -0.13
RNF43-202ENST00000577625 IFNAR2P48551 515 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 ATXN1P54253 815 aaKnown RBP14.26□□□□□ -0.13
RNF43-202ENST00000577625 SH3BGRP55822 239 aaPredicted RBP14.26□□□□□ -0.13
RNF43-202ENST00000577625 RAB41Q5JT25 222 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 IZUMO3Q5VZ72 239 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 STRADAQ7RTN6 431 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 DEFB106AQ8N104 65 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 GLIS1Q8NBF1 620 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 PHC3Q8NDX5 983 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 LZICQ8WZA0 190 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 NUDCD1Q96RS6 583 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 TMEM121Q9BTD3 319 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 SEMA4AQ9H3S1 761 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 PCDH9Q9HC56 1237 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 CSNK1G1Q9HCP0 422 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 PDP2Q9P2J9 529 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 KANSL3Q9P2N6 904 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 PCDHB8Q9UN66 801 aa14.26□□□□□ -0.13
RNF43-202ENST00000577625 ARHGEF37A1IGU5 675 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 ZNF487B1APH4 448 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 ATP6V1G1O75348 118 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 LMNAP02545 664 aaKnown RBP14.25□□□□□ -0.13
RNF43-202ENST00000577625 MNX1P50219 401 aaPredicted RBP14.25□□□□□ -0.13
RNF43-202ENST00000577625 ATN1P54259 1190 aaPredicted RBP14.25□□□□□ -0.13
RNF43-202ENST00000577625 YWHAZP63104 245 aaKnown RBP14.25□□□□□ -0.13
RNF43-202ENST00000577625 RNASELQ05823 741 aaKnown RBP14.25□□□□□ -0.13
RNF43-202ENST00000577625 KRT81Q14533 505 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 CA9Q16790 459 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 WASHC2DQ5SRD0 308 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 OTUD1Q5VV17 481 aaPredicted RBP14.25□□□□□ -0.13
RNF43-202ENST00000577625 DENND2CQ68D51 928 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 TRMT10CQ7L0Y3 403 aaKnown RBP14.25□□□□□ -0.13
RNF43-202ENST00000577625 TAOK1Q7L7X3 1001 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 PRUNE1Q86TP1 453 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 LRRTM3Q86VH5 581 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 NCSTNQ92542 709 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 SEPT8Q92599 483 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 ZNF333Q96JL9 665 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 RNF157Q96PX1 679 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 MAK16Q9BXY0 300 aaKnown RBP14.25□□□□□ -0.13
RNF43-202ENST00000577625 ULBP1Q9BZM6 244 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 LRMDAQ9H2I8 198 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 PCDH18Q9HCL0 1135 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 PRKAG3Q9UGI9 489 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 ZNF510Q9Y2H8 683 aa14.25□□□□□ -0.13
RNF43-202ENST00000577625 KIAA0100Q14667 2235 aaKnown RBP14.25□□□□□ -0.13
RNF43-202ENST00000577625 SGK1O00141 431 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 SMAPO00193 183 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 DNALI1O14645 258 aaPredicted RBP14.24□□□□□ -0.13
RNF43-202ENST00000577625 NRP1O14786 923 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 NVLO15381 856 aaKnown RBP14.24□□□□□ -0.13
RNF43-202ENST00000577625 FBXO21O94952 628 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 IL4RP24394 825 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 OR1G1P47890 313 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 DAOAP59103 153 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 SETDB1Q15047 1291 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 P3H1Q32P28 736 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 SLC25A52Q3SY17 297 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 RNF43Q68DV7 783 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 HFE2Q6ZVN8 426 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 ANKRD33Q7Z3H0 272 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 CCDC25Q86WR0 208 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 NT5C3BQ969T7 300 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 SCLYQ96I15 445 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 GBP5Q96PP8 586 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 SLC2A13Q96QE2 648 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 ZNF670Q9BS34 389 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 FOXP3Q9BZS1 431 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 PREBQ9HCU5 417 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 FGFR1OP2Q9NVK5 253 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 RPL26L1Q9UNX3 145 aaKnown RBP14.24□□□□□ -0.13
RNF43-202ENST00000577625 PRG3Q9Y2Y8 225 aaPredicted RBP14.24□□□□□ -0.13
RNF43-202ENST00000577625 MAGEA13PA6NCF6 341 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 NDC80O14777 642 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 RIPK2O43353 540 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 BDNFP23560 247 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 CHKAP35790 457 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 GATMP50440 423 aa14.24□□□□□ -0.13
RNF43-202ENST00000577625 PITX1P78337 314 aaPredicted RBP14.24□□□□□ -0.13
RNF43-202ENST00000577625 YWHAHQ04917 246 aaPredicted RBP14.24□□□□□ -0.13
RNF43-202ENST00000577625 SLC29A2Q14542 456 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms