RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 SMG1Q96Q15 3661 aaKnown RBP10.9□□□□□ -0.66
TVP23B-208ENST00000575261 YJEFN3A6XGL0 299 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 E7ENQ6 273 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 O00370 1275 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 TSPAN3O60637 253 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 CBFA2T3O75081 653 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 VDRP11473 427 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 HLA-EP13747 358 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 TBXAS1P24557 533 aaPredicted RBP10.89□□□□□ -0.67
TVP23B-208ENST00000575261 AFF3P51826 1226 aaKnown RBP10.89□□□□□ -0.67
TVP23B-208ENST00000575261 TTC31Q49AM3 519 aaPredicted RBP10.89□□□□□ -0.67
TVP23B-208ENST00000575261 ADGRF1Q5T601 910 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 BSPRYQ5W0U4 402 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 CHST9Q7L1S5 443 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 FAM124AQ86V42 546 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 PROSER1Q86XN7 944 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 ZC3H3Q8IXZ2 948 aaKnown RBP10.89□□□□□ -0.67
TVP23B-208ENST00000575261 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.89□□□□□ -0.67
TVP23B-208ENST00000575261 ZNF557Q8N988 423 aaPredicted RBP10.89□□□□□ -0.67
TVP23B-208ENST00000575261 SETD7Q8WTS6 366 aaKnown RBP10.89□□□□□ -0.67
TVP23B-208ENST00000575261 CYB5D2Q8WUJ1 264 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 KCTD13Q8WZ19 329 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 NDRG1Q92597 394 aaKnown RBP10.89□□□□□ -0.67
TVP23B-208ENST00000575261 EDEM1Q92611 657 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 TMEM245Q9H330 911 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 TM7SF3Q9NS93 570 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 ABCB8Q9NUT2 735 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 SFMBT1Q9UHJ3 866 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 GGA2Q9UJY4 613 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 PLA2G4CQ9UP65 541 aa10.89□□□□□ -0.67
TVP23B-208ENST00000575261 FNDC3AQ9Y2H6 1198 aaKnown RBP10.89□□□□□ -0.67
TVP23B-208ENST00000575261 FLRT2O43155 660 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 MSI1O43347 362 aaKnown RBP10.88□□□□□ -0.67
TVP23B-208ENST00000575261 ATP5BP06576 529 aaKnown RBP10.88□□□□□ -0.67
TVP23B-208ENST00000575261 C7P10643 843 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 PABPC1P11940 636 aaKnown RBP10.88□□□□□ -0.67
TVP23B-208ENST00000575261 LCP1P13796 627 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 PRCPP42785 496 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 DAOAP59103 153 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 FKBP3Q00688 224 aaKnown RBP10.88□□□□□ -0.67
TVP23B-208ENST00000575261 ZBTB16Q05516 673 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 LRRC63Q05C16 580 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 RING1Q06587 406 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 PNOCQ13519 176 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 TEAD4Q15561 434 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 HLA-BQ31612 363 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 COBLL1Q53SF7 1204 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 ZNF658Q5TYW1 1059 aaPredicted RBP10.88□□□□□ -0.67
TVP23B-208ENST00000575261 NUGGCQ68CJ6 796 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 MSANTD2Q6P1R3 559 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 ADIPOR2Q86V24 386 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 SCML4Q8N228 414 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 ZNF366Q8N895 744 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 PNPLA1Q8N8W4 532 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 C1orf216Q8TAB5 229 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 UBA3Q8TBC4 463 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 TMA16Q96EY4 203 aaKnown RBP10.88□□□□□ -0.67
TVP23B-208ENST00000575261 IRX2Q9BZI1 471 aaPredicted RBP10.88□□□□□ -0.67
TVP23B-208ENST00000575261 BTBD1Q9H0C5 482 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 C6orf106Q9H6K1 298 aaPredicted RBP10.88□□□□□ -0.67
TVP23B-208ENST00000575261 IL21RQ9HBE5 538 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 ARMCX3Q9UH62 379 aaPredicted RBP10.88□□□□□ -0.67
TVP23B-208ENST00000575261 KIAA1257Q9ULG3 409 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 LHX6Q9UPM6 363 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.88□□□□□ -0.67
TVP23B-208ENST00000575261 PCDHGB2Q9Y5G2 931 aa10.88□□□□□ -0.67
TVP23B-208ENST00000575261 NUMA1Q14980 2115 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 A0A1B0GVT2 93 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 TYW5A2RUC4 315 aaKnown RBP10.87□□□□□ -0.67
TVP23B-208ENST00000575261 IRAK2O43187 625 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 SEMA4FO95754 770 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 IGLV3-27P01718 113 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 DNTTP04053 509 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 PAEPP09466 180 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 DLDP09622 509 aaKnown RBP10.87□□□□□ -0.67
TVP23B-208ENST00000575261 ACSL1P33121 698 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 GRIA4P48058 902 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 SLC11A2P49281 568 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 SGSHP51688 502 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 BNC1Q01954 994 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 SCAPQ12770 1279 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 STILQ15468 1287 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 PTPRNQ16849 979 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 PKDCCQ504Y2 493 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 MPP7Q5T2T1 576 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 MBLAC2Q68D91 279 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 TMEM270Q6UE05 265 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 KIAA0907Q7Z7F0 614 aaPredicted RBP10.87□□□□□ -0.67
TVP23B-208ENST00000575261 UNC45BQ8IWX7 931 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 UBR7Q8N806 425 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 BAHD1Q8TBE0 780 aaPredicted RBP10.87□□□□□ -0.67
TVP23B-208ENST00000575261 IRGQQ8WZA9 623 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 GOLGA1Q92805 767 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 SLC35C1Q96A29 364 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 GSDMAQ96QA5 445 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 CDC6Q99741 560 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 GTPBP4Q9BZE4 634 aaKnown RBP10.87□□□□□ -0.67
TVP23B-208ENST00000575261 GDPD2Q9HCC8 539 aa10.87□□□□□ -0.67
TVP23B-208ENST00000575261 TRIM49BA6NDI0 452 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 M0QYV0 167 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms