RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 WDR60Q8WVS4 1066 aa9.21□□□□□ -0.93
NCBP3-204ENST00000574911 FAM49AQ9H0Q0 323 aaPredicted RBP9.21□□□□□ -0.93
NCBP3-204ENST00000574911 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.21□□□□□ -0.93
NCBP3-204ENST00000574911 SF3B1O75533 1304 aaKnown RBP eCLIP9.21□□□□□ -0.93
NCBP3-204ENST00000574911 SBF1O95248 1867 aa9.21□□□□□ -0.93
NCBP3-204ENST00000574911 SMIM28A0A1B0GU29 152 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 B2RBV5 119 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 OPHN1O60890 802 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 ALDOAP04075 364 aaKnown RBP9.21□□□□□ -0.94
NCBP3-204ENST00000574911 ENO1P06733 434 aaKnown RBP9.21□□□□□ -0.94
NCBP3-204ENST00000574911 KITP10721 976 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 DARSP14868 501 aaKnown RBP9.21□□□□□ -0.94
NCBP3-204ENST00000574911 PGAM1P18669 254 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 AKAP5P24588 427 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 MGAT1P26572 445 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 PGM1P36871 562 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 VHLP40337 213 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 RCN1Q15293 331 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 FASTKD1Q53R41 847 aaKnown RBP9.21□□□□□ -0.94
NCBP3-204ENST00000574911 LDLRAD1Q5T700 205 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 C16orf46Q6P387 395 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 ARHGAP24Q8N264 748 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 NDRG1Q92597 394 aaKnown RBP9.21□□□□□ -0.94
NCBP3-204ENST00000574911 NT5C3BQ969T7 300 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 P2RY11Q96G91 374 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 ZNF560Q96MR9 790 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 OSMRQ99650 979 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 SIKE1Q9BRV8 207 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 SLC17A6Q9P2U8 582 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 MARCOQ9UEW3 520 aaPredicted RBP9.21□□□□□ -0.94
NCBP3-204ENST00000574911 TAGLN3Q9UI15 199 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 SUFUQ9UMX1 484 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 PLA2G4CQ9UP65 541 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 GINS2Q9Y248 185 aa9.21□□□□□ -0.94
NCBP3-204ENST00000574911 F5H423 210 aaPredicted RBP9.2□□□□□ -0.94
NCBP3-204ENST00000574911 H3BRJ5 948 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 RNF103O00237 685 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 TPP1O14773 563 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 STRNO43815 780 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 GLRA3O75311 464 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 STK10O94804 968 aaKnown RBP9.2□□□□□ -0.94
NCBP3-204ENST00000574911 SERPINA6P08185 405 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 FGF3P11487 239 aaPredicted RBP9.2□□□□□ -0.94
NCBP3-204ENST00000574911 KCNE1P15382 129 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 CDC25CP30307 473 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 AXLP30530 894 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 PNPLA4P41247 253 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 CPA2P48052 419 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 CRADDP78560 199 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 SLC34A1Q06495 639 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 PDE1CQ14123 709 aaPredicted RBP9.2□□□□□ -0.94
NCBP3-204ENST00000574911 PAFAH1B3Q15102 231 aaKnown RBP9.2□□□□□ -0.94
NCBP3-204ENST00000574911 TBCCQ15814 346 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 TEDDM1Q5T9Z0 273 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 ANO7Q6IWH7 933 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 ZCCHC23Q6ZST2 131 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 PIGZQ86VD9 579 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 OSTM1Q86WC4 334 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 FBXO27Q8NI29 283 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 RNF139Q8WU17 664 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 NRG4Q8WWG1 115 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 DNAJC9Q8WXX5 260 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 CDKL2Q92772 493 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 ZNF333Q96JL9 665 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 TSPAN18Q96SJ8 248 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.2□□□□□ -0.94
NCBP3-204ENST00000574911 SMIM35A0A1B0GVV1 85 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 A6NHS1 94 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 SPECC1L-ADORA2AF8WAN1 911 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 ITM2AO43736 263 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 PLIN3O60664 434 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 PRKCGP05129 697 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 WARSP23381 471 aaKnown RBP9.2□□□□□ -0.94
NCBP3-204ENST00000574911 NOS2P35228 1153 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 TAF6P49848 677 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 SESN2P58004 480 aaPredicted RBP9.2□□□□□ -0.94
NCBP3-204ENST00000574911 PITX1P78337 314 aaPredicted RBP9.2□□□□□ -0.94
NCBP3-204ENST00000574911 AP1B1Q10567 949 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 TUBB3Q13509 450 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 TSNAXIP1Q2TAA8 658 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 N4BP2L1Q5TBK1 243 aaPredicted RBP9.2□□□□□ -0.94
NCBP3-204ENST00000574911 CASC4Q6P4E1 433 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 RBM15BQ8NDT2 890 aaKnown RBP9.2□□□□□ -0.94
NCBP3-204ENST00000574911 APPL2Q8NEU8 664 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 ZNF778Q96MU6 729 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 NPY6RQ99463 290 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 HNRNPABQ99729 332 aaKnown RBP9.2□□□□□ -0.94
NCBP3-204ENST00000574911 EBF4Q9BQW3 602 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 FAM167BQ9BTA0 163 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 NAT9Q9BTE0 207 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 APOL6Q9BWW8 343 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 DUSP16Q9BY84 665 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 TRIM6Q9C030 488 aaPredicted RBP9.2□□□□□ -0.94
NCBP3-204ENST00000574911 DNAI2Q9GZS0 605 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 TMPRSS4Q9NRS4 437 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 NMRK1Q9NWW6 199 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 KLK14Q9P0G3 267 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 IGSF9Q9P2J2 1179 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 DCDC2Q9UHG0 476 aa9.2□□□□□ -0.94
NCBP3-204ENST00000574911 PDCD11Q14690 1871 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms