RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 PRKD1Q15139 912 aaPredicted RBP24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 UNC5BQ8IZJ1 945 aa24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 CCDC63Q8NA47 563 aa24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 FRMD8Q9BZ67 464 aaPredicted RBP24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 PTCH2Q9Y6C5 1203 aa24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 DCLK1O15075 740 aa24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 SPAG6O75602 509 aa24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 CSH1P0DML2 217 aa24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 CSH2P0DML3 217 aa24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 ODC1P11926 461 aa24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 ERCC2P18074 760 aa24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 NKX3-2P78367 333 aa24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 CBLBQ13191 982 aa24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 SSU72Q9NP77 194 aaKnown RBP24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 HAUS2Q9NVX0 235 aa24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 ARL2BPQ9Y2Y0 163 aa24.4■■□□□ 1.5
NPLOC4-217ENST00000574897 KCNK1O00180 336 aa24.39■■□□□ 1.5
NPLOC4-217ENST00000574897 B4GALT3O60512 393 aa24.39■■□□□ 1.5
NPLOC4-217ENST00000574897 APOEP02649 317 aa24.39■■□□□ 1.5
NPLOC4-217ENST00000574897 PYGBP11216 843 aa24.39■■□□□ 1.5
NPLOC4-217ENST00000574897 PCSK1P29120 753 aa24.39■■□□□ 1.5
NPLOC4-217ENST00000574897 WASHC5Q12768 1159 aa24.39■■□□□ 1.5
NPLOC4-217ENST00000574897 OLIG2Q13516 323 aa24.39■■□□□ 1.5
NPLOC4-217ENST00000574897 LRRC8CQ8TDW0 803 aa24.39■■□□□ 1.5
NPLOC4-217ENST00000574897 DEPDC1BQ8WUY9 529 aa24.39■■□□□ 1.5
NPLOC4-217ENST00000574897 EBNA1BP2Q99848 306 aaKnown RBP24.39■■□□□ 1.5
NPLOC4-217ENST00000574897 IQANK1A0A1B0GTG1 560 aa24.39■■□□□ 1.49
NPLOC4-217ENST00000574897 HACD1B0YJ81 288 aa24.39■■□□□ 1.49
NPLOC4-217ENST00000574897 ZWINTO95229 277 aa24.39■■□□□ 1.49
NPLOC4-217ENST00000574897 PSMB4P28070 264 aa24.39■■□□□ 1.49
NPLOC4-217ENST00000574897 BMPR2Q13873 1038 aa24.39■■□□□ 1.49
NPLOC4-217ENST00000574897 SMAD1Q15797 465 aaKnown RBP24.39■■□□□ 1.49
NPLOC4-217ENST00000574897 C4orf22Q6V702 233 aa24.39■■□□□ 1.49
NPLOC4-217ENST00000574897 SH2D5Q6ZV89 423 aa24.39■■□□□ 1.49
NPLOC4-217ENST00000574897 CNPY4Q8N129 248 aa24.39■■□□□ 1.49
NPLOC4-217ENST00000574897 ZNF276Q8N554 614 aa24.39■■□□□ 1.49
NPLOC4-217ENST00000574897 NOD1Q9Y239 953 aa24.39■■□□□ 1.49
NPLOC4-217ENST00000574897 TRIM49D1C9J1S8 452 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 SEMA3BQ13214 749 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 PAFAH1B3Q15102 231 aaKnown RBP24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 SLC26A11Q86WA9 606 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 LRRC6Q86X45 466 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 FITM2Q8N6M3 262 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 NPWQ8N729 165 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 ZNF75CPQ92670 426 aaPredicted RBP24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 PGLYRP2Q96PD5 576 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 FBXW11Q9UKB1 542 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 SLC12A4Q9UP95 1085 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 FRMPD3Q5JV73 1810 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 C9IYK1 514 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 PRKCHP24723 683 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 IFRD2Q12894 506 aaPredicted RBP24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 ITGA7Q13683 1181 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 TRIM71Q2Q1W2 868 aaKnown RBP24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 INTS6LQ5JSJ4 861 aaKnown RBP24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 BSPRYQ5W0U4 402 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 ECHDC2Q86YB7 292 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 ZNF567Q8N184 647 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 ANKLE1Q8NAG6 615 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 SCAMP5Q8TAC9 235 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 CSNK1G1Q9HCP0 422 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 SLC17A6Q9P2U8 582 aa24.38■■□□□ 1.49
NPLOC4-217ENST00000574897 WDR27A2RRH5 827 aa24.37■■□□□ 1.49
NPLOC4-217ENST00000574897 LPXNO60711 386 aa24.37■■□□□ 1.49
NPLOC4-217ENST00000574897 FAM171BQ6P995 826 aa24.37■■□□□ 1.49
NPLOC4-217ENST00000574897 COLEC11Q9BWP8 271 aa24.37■■□□□ 1.49
NPLOC4-217ENST00000574897 PATJQ8NI35 1801 aa24.37■■□□□ 1.49
NPLOC4-217ENST00000574897 MYO16Q9Y6X6 1858 aa24.37■■□□□ 1.49
NPLOC4-217ENST00000574897 EDF1O60869 148 aaKnown RBP24.37■■□□□ 1.49
NPLOC4-217ENST00000574897 TOMM70O94826 608 aa24.37■■□□□ 1.49
NPLOC4-217ENST00000574897 RAB27AP51159 221 aa24.37■■□□□ 1.49
NPLOC4-217ENST00000574897 TPI1P60174 286 aa24.37■■□□□ 1.49
NPLOC4-217ENST00000574897 RGS9BPQ6ZS82 235 aa24.37■■□□□ 1.49
NPLOC4-217ENST00000574897 PTPRN2Q92932 1015 aa24.37■■□□□ 1.49
NPLOC4-217ENST00000574897 PKMYT1Q99640 499 aa24.37■■□□□ 1.49
NPLOC4-217ENST00000574897 SLC40A1Q9NP59 571 aa24.37■■□□□ 1.49
NPLOC4-217ENST00000574897 CAPN15O75808 1086 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 GLUD2P49448 558 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 SESN2P58004 480 aaPredicted RBP24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 GRIK3Q13003 919 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 TUSC3Q13454 348 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 PDK1Q15118 436 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 SEPT7Q16181 437 aaKnown RBP24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 CDHR3Q6ZTQ4 885 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 BZW1Q7L1Q6 419 aaKnown RBP24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 RSPH1Q8WYR4 309 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 NTAN1Q96AB6 310 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 LRRC39Q96DD0 335 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 FAM111AQ96PZ2 611 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 SLC9A7Q96T83 725 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 ACBD6Q9BR61 282 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 AOC2O75106 756 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 NEK3P51956 506 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 TAC4Q86UU9 113 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 GSDMBQ8TAX9 411 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 TKTL2Q9H0I9 626 aa24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 XAB2Q9HCS7 855 aaKnown RBP24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 MRPL42Q9Y6G3 142 aaKnown RBP24.36■■□□□ 1.49
NPLOC4-217ENST00000574897 PGFP49763 221 aa24.35■■□□□ 1.49
NPLOC4-217ENST00000574897 SLC18A2Q05940 514 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms