RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 MPPE1Q53F39 396 aa18.31■□□□□ 0.52
CCDC40-211ENST00000574099 C1orf220Q5T0J3 134 aa18.31■□□□□ 0.52
CCDC40-211ENST00000574099 ERICH6BQ5W0A0 696 aa18.31■□□□□ 0.52
CCDC40-211ENST00000574099 KIAA0895LQ68EN5 471 aa18.31■□□□□ 0.52
CCDC40-211ENST00000574099 FAM217AQ8IXS0 508 aa18.31■□□□□ 0.52
CCDC40-211ENST00000574099 ZC3H3Q8IXZ2 948 aaKnown RBP18.31■□□□□ 0.52
CCDC40-211ENST00000574099 GANCQ8TET4 914 aa18.31■□□□□ 0.52
CCDC40-211ENST00000574099 WFIKKN2Q8TEU8 576 aa18.31■□□□□ 0.52
CCDC40-211ENST00000574099 PLD4Q96BZ4 506 aa18.31■□□□□ 0.52
CCDC40-211ENST00000574099 BACH2Q9BYV9 841 aa18.31■□□□□ 0.52
CCDC40-211ENST00000574099 IMPG2Q9BZV3 1241 aa18.31■□□□□ 0.52
CCDC40-211ENST00000574099 MTG2Q9H4K7 406 aa18.31■□□□□ 0.52
CCDC40-211ENST00000574099 MMRN2Q9H8L6 949 aa18.31■□□□□ 0.52
CCDC40-211ENST00000574099 SGK2Q9HBY8 427 aa18.31■□□□□ 0.52
CCDC40-211ENST00000574099 TK2O00142 265 aa18.3■□□□□ 0.52
CCDC40-211ENST00000574099 PAPSS1O43252 624 aaPredicted RBP18.3■□□□□ 0.52
CCDC40-211ENST00000574099 PPP6R2O75170 966 aa18.3■□□□□ 0.52
CCDC40-211ENST00000574099 LDOC1O95751 146 aaPredicted RBP18.3■□□□□ 0.52
CCDC40-211ENST00000574099 NR3C1P04150 777 aa18.3■□□□□ 0.52
CCDC40-211ENST00000574099 PLA2G2AP14555 144 aa18.3■□□□□ 0.52
CCDC40-211ENST00000574099 TARDBPQ13148 414 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCDC40-211ENST00000574099 HES3Q5TGS1 186 aa18.3■□□□□ 0.52
CCDC40-211ENST00000574099 ADIPOR2Q86V24 386 aa18.3■□□□□ 0.52
CCDC40-211ENST00000574099 ARHGAP18Q8N392 663 aa18.3■□□□□ 0.52
CCDC40-211ENST00000574099 KIAA0895Q8NCT3 520 aa18.3■□□□□ 0.52
CCDC40-211ENST00000574099 TMC2Q8TDI7 906 aa18.3■□□□□ 0.52
CCDC40-211ENST00000574099 NDRG1Q92597 394 aaKnown RBP18.3■□□□□ 0.52
CCDC40-211ENST00000574099 ELF4Q99607 663 aaPredicted RBP18.3■□□□□ 0.52
CCDC40-211ENST00000574099 NIF3L1Q9GZT8 377 aa18.3■□□□□ 0.52
CCDC40-211ENST00000574099 ZSCAN16Q9H4T2 348 aaPredicted RBP18.3■□□□□ 0.52
CCDC40-211ENST00000574099 MAGEF1Q9HAY2 307 aa18.3■□□□□ 0.52
CCDC40-211ENST00000574099 CYP3A43Q9HB55 503 aa18.3■□□□□ 0.52
CCDC40-211ENST00000574099 GGA2Q9UJY4 613 aa18.3■□□□□ 0.52
CCDC40-211ENST00000574099 PCDHGA1Q9Y5H4 931 aa18.3■□□□□ 0.52
CCDC40-211ENST00000574099 PVALEFA0A1B0GWK0 134 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 VILLO15195 856 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 RRP8O43159 456 aaKnown RBP18.29■□□□□ 0.52
CCDC40-211ENST00000574099 CUTAO60888 179 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 ITGAVP06756 1048 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 TRIM49P0CI25 452 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 TRIM49CP0CI26 452 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 PABPC1P11940 636 aaKnown RBP18.29■□□□□ 0.52
CCDC40-211ENST00000574099 ABCB4P21439 1286 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 SGSHP51688 502 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 RACK1P63244 317 aaKnown RBP18.29■□□□□ 0.52
CCDC40-211ENST00000574099 ZBTB16Q05516 673 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 STK4Q13043 487 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 MBLAC2Q68D91 279 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 ZNF776Q68DI1 518 aaPredicted RBP18.29■□□□□ 0.52
CCDC40-211ENST00000574099 PIGZQ86VD9 579 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 SLC9A9Q8IVB4 645 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 FMNL3Q8IVF7 1028 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 AHI1Q8N157 1196 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 EID2Q8N6I1 236 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 TAS1R2Q8TE23 839 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 HEXIM2Q96MH2 286 aaKnown RBP18.29■□□□□ 0.52
CCDC40-211ENST00000574099 FBRSQ9HAH7 460 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 SERGEFQ9UGK8 458 aa18.29■□□□□ 0.52
CCDC40-211ENST00000574099 DFNA5O60443 496 aa18.28■□□□□ 0.52
CCDC40-211ENST00000574099 WNT1P04628 370 aa18.28■□□□□ 0.52
CCDC40-211ENST00000574099 GCLMP48507 274 aa18.28■□□□□ 0.52
CCDC40-211ENST00000574099 HARS2P49590 506 aaKnown RBP18.28■□□□□ 0.52
CCDC40-211ENST00000574099 ACADVLP49748 655 aa18.28■□□□□ 0.52
CCDC40-211ENST00000574099 SHBQ15464 509 aa18.28■□□□□ 0.52
CCDC40-211ENST00000574099 TRIP4Q15650 581 aaPredicted RBP18.28■□□□□ 0.52
CCDC40-211ENST00000574099 ZNF605Q86T29 641 aa18.28■□□□□ 0.52
CCDC40-211ENST00000574099 ZNF843Q8N446 348 aa18.28■□□□□ 0.52
CCDC40-211ENST00000574099 WFDC5Q8TCV5 224 aa18.28■□□□□ 0.52
CCDC40-211ENST00000574099 ULBP1Q9BZM6 244 aa18.28■□□□□ 0.52
CCDC40-211ENST00000574099 KCTD10Q9H3F6 313 aa18.28■□□□□ 0.52
CCDC40-211ENST00000574099 AASDHPPTQ9NRN7 309 aa18.28■□□□□ 0.52
CCDC40-211ENST00000574099 EXOC1Q9NV70 894 aa18.28■□□□□ 0.52
CCDC40-211ENST00000574099 SFMBT1Q9UHJ3 866 aa18.28■□□□□ 0.52
CCDC40-211ENST00000574099 NCKAP1Q9Y2A7 1128 aa18.28■□□□□ 0.52
CCDC40-211ENST00000574099 KNTC1P50748 2209 aa18.27■□□□□ 0.52
CCDC40-211ENST00000574099 A0A1W2PPC4 97 aa18.27■□□□□ 0.52
CCDC40-211ENST00000574099 IKBKBO14920 756 aa18.27■□□□□ 0.52
CCDC40-211ENST00000574099 DLDP09622 509 aaKnown RBP18.27■□□□□ 0.52
CCDC40-211ENST00000574099 CD70P32970 193 aa18.27■□□□□ 0.52
CCDC40-211ENST00000574099 VAMP7P51809 220 aa18.27■□□□□ 0.52
CCDC40-211ENST00000574099 TKTL1P51854 596 aa18.27■□□□□ 0.52
CCDC40-211ENST00000574099 NCEH1Q6PIU2 408 aa18.27■□□□□ 0.52
CCDC40-211ENST00000574099 BAP1Q92560 729 aa18.27■□□□□ 0.52
CCDC40-211ENST00000574099 EDEM1Q92611 657 aa18.27■□□□□ 0.52
CCDC40-211ENST00000574099 GOLGA1Q92805 767 aa18.27■□□□□ 0.52
CCDC40-211ENST00000574099 TMA16Q96EY4 203 aaKnown RBP18.27■□□□□ 0.52
CCDC40-211ENST00000574099 DNAI2Q9GZS0 605 aa18.27■□□□□ 0.52
CCDC40-211ENST00000574099 PABPC3Q9H361 631 aaKnown RBP18.27■□□□□ 0.52
CCDC40-211ENST00000574099 EBF2Q9HAK2 575 aa18.27■□□□□ 0.52
CCDC40-211ENST00000574099 FBXL12Q9NXK8 326 aa18.27■□□□□ 0.52
CCDC40-211ENST00000574099 FRMD4BQ9Y2L6 1034 aa18.27■□□□□ 0.52
CCDC40-211ENST00000574099 PTPRQQ9UMZ3 2332 aa18.27■□□□□ 0.51
CCDC40-211ENST00000574099 NYNRINQ9P2P1 1898 aaKnown RBP18.26■□□□□ 0.51
CCDC40-211ENST00000574099 A0A1W2PP55 124 aa18.26■□□□□ 0.51
CCDC40-211ENST00000574099 MSI1O43347 362 aaKnown RBP18.26■□□□□ 0.51
CCDC40-211ENST00000574099 KLRC4O43908 158 aa18.26■□□□□ 0.51
CCDC40-211ENST00000574099 ATP5BP06576 529 aaKnown RBP18.26■□□□□ 0.51
CCDC40-211ENST00000574099 C7P10643 843 aa18.26■□□□□ 0.51
CCDC40-211ENST00000574099 POLR2EP19388 210 aaKnown RBP18.26■□□□□ 0.51
CCDC40-211ENST00000574099 GALCP54803 685 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms